Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Kcnu1O54982 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Kcnu1O54982 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Kcnu1O54982 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Kcnu1O54982 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Kcnu1O54982 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Kcnu1O54982 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Kcnu1O54982 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Kcnu1O54982 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Kcnu1O54982 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Kcnu1O54982 Gm23634-201ENSMUST00000175071 91 ntBASIC17.02■□□□□ 0.32
Kcnu1O54982 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.02■□□□□ 0.32
Kcnu1O54982 Mir7071-201ENSMUST00000184847 69 ntBASIC17.02■□□□□ 0.32
Kcnu1O54982 Gm29518-201ENSMUST00000190858 372 ntBASIC17.02■□□□□ 0.32
Kcnu1O54982 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Kcnu1O54982 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Kcnu1O54982 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Kcnu1O54982 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Kcnu1O54982 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Kcnu1O54982 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Kcnu1O54982 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Kcnu1O54982 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Kcnu1O54982 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Kcnu1O54982 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Kcnu1O54982 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Kcnu1O54982 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.02■□□□□ 0.31
Kcnu1O54982 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Kcnu1O54982 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Kcnu1O54982 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Kcnu1O54982 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Kcnu1O54982 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Kcnu1O54982 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Kcnu1O54982 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.01■□□□□ 0.31
Kcnu1O54982 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Kcnu1O54982 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Kcnu1O54982 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Kcnu1O54982 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Kcnu1O54982 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Kcnu1O54982 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Kcnu1O54982 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Kcnu1O54982 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Kcnu1O54982 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Kcnu1O54982 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Kcnu1O54982 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Kcnu1O54982 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Kcnu1O54982 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Kcnu1O54982 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Kcnu1O54982 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Kcnu1O54982 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Kcnu1O54982 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Kcnu1O54982 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17■□□□□ 0.31
Kcnu1O54982 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Kcnu1O54982 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17■□□□□ 0.31
Kcnu1O54982 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Kcnu1O54982 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17■□□□□ 0.31
Kcnu1O54982 Gm15794-201ENSMUST00000120182 631 ntBASIC17■□□□□ 0.31
Kcnu1O54982 Gm6659-201ENSMUST00000174752 547 ntBASIC17■□□□□ 0.31
Kcnu1O54982 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17■□□□□ 0.31
Kcnu1O54982 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Kcnu1O54982 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17■□□□□ 0.31
Kcnu1O54982 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Kcnu1O54982 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Kcnu1O54982 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Kcnu1O54982 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Kcnu1O54982 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Kcnu1O54982 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Kcnu1O54982 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Kcnu1O54982 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Kcnu1O54982 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Kcnu1O54982 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Kcnu1O54982 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Kcnu1O54982 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Kcnu1O54982 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Kcnu1O54982 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.99■□□□□ 0.31
Kcnu1O54982 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.99■□□□□ 0.31
Kcnu1O54982 Mir6404-201ENSMUST00000183699 94 ntBASIC16.99■□□□□ 0.31
Kcnu1O54982 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Kcnu1O54982 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Kcnu1O54982 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Kcnu1O54982 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Kcnu1O54982 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Kcnu1O54982 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Kcnu1O54982 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Kcnu1O54982 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Kcnu1O54982 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Kcnu1O54982 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Kcnu1O54982 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Kcnu1O54982 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Kcnu1O54982 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.99■□□□□ 0.31
Kcnu1O54982 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Kcnu1O54982 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Kcnu1O54982 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Kcnu1O54982 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Kcnu1O54982 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.98■□□□□ 0.31
Kcnu1O54982 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Kcnu1O54982 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Kcnu1O54982 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Kcnu1O54982 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Kcnu1O54982 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Kcnu1O54982 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms