Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn5O54942 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn5O54942 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.55■□□□□ 0.24
Cldn5O54942 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn5O54942 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.55■□□□□ 0.24
Cldn5O54942 Gm18733-201ENSMUST00000173950 856 ntBASIC16.55■□□□□ 0.24
Cldn5O54942 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn5O54942 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn5O54942 Gm2651-201ENSMUST00000203560 838 ntBASIC16.55■□□□□ 0.24
Cldn5O54942 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.55■□□□□ 0.24
Cldn5O54942 Gm18622-201ENSMUST00000219361 595 ntBASIC16.55■□□□□ 0.24
Cldn5O54942 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn5O54942 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cldn5O54942 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn5O54942 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.55■□□□□ 0.24
Cldn5O54942 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Cldn5O54942 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cldn5O54942 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn5O54942 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn5O54942 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn5O54942 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn5O54942 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cldn5O54942 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn5O54942 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn5O54942 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn5O54942 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn5O54942 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.54■□□□□ 0.24
Cldn5O54942 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn5O54942 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn5O54942 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Cldn5O54942 Gm6257-201ENSMUST00000163864 910 ntBASIC16.54■□□□□ 0.24
Cldn5O54942 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn5O54942 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.54■□□□□ 0.24
Cldn5O54942 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn5O54942 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn5O54942 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.54■□□□□ 0.24
Cldn5O54942 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn5O54942 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn5O54942 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn5O54942 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn5O54942 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn5O54942 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Cldn5O54942 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn5O54942 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn5O54942 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Cldn5O54942 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn5O54942 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn5O54942 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn5O54942 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.53■□□□□ 0.24
Cldn5O54942 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Cldn5O54942 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn5O54942 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn5O54942 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn5O54942 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Cldn5O54942 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Cldn5O54942 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn5O54942 Gm15173-201ENSMUST00000122049 433 ntBASIC16.53■□□□□ 0.24
Cldn5O54942 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cldn5O54942 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn5O54942 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.53■□□□□ 0.24
Cldn5O54942 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.53■□□□□ 0.24
Cldn5O54942 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn5O54942 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Cldn5O54942 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn5O54942 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn5O54942 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
Cldn5O54942 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn5O54942 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn5O54942 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn5O54942 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn5O54942 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn5O54942 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.53■□□□□ 0.24
Cldn5O54942 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn5O54942 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn5O54942 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn5O54942 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Cldn5O54942 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn5O54942 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn5O54942 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Cldn5O54942 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn5O54942 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn5O54942 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn5O54942 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn5O54942 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn5O54942 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.52■□□□□ 0.24
Cldn5O54942 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn5O54942 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.52■□□□□ 0.24
Cldn5O54942 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.52■□□□□ 0.24
Cldn5O54942 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn5O54942 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn5O54942 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn5O54942 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn5O54942 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.52■□□□□ 0.24
Cldn5O54942 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn5O54942 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn5O54942 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn5O54942 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn5O54942 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Cldn5O54942 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn5O54942 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms