Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf2O35218 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf2O35218 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf2O35218 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf2O35218 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Cpsf2O35218 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf2O35218 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.11■□□□□ 0.33
Cpsf2O35218 Gm15565-201ENSMUST00000118890 427 ntBASIC17.11■□□□□ 0.33
Cpsf2O35218 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf2O35218 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Cpsf2O35218 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.11■□□□□ 0.33
Cpsf2O35218 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Cpsf2O35218 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf2O35218 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf2O35218 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf2O35218 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf2O35218 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf2O35218 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cpsf2O35218 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf2O35218 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.11■□□□□ 0.33
Cpsf2O35218 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.1■□□□□ 0.33
Cpsf2O35218 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.1■□□□□ 0.33
Cpsf2O35218 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cpsf2O35218 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cpsf2O35218 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cpsf2O35218 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cpsf2O35218 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Cpsf2O35218 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf2O35218 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cpsf2O35218 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf2O35218 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf2O35218 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cpsf2O35218 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.09■□□□□ 0.33
Cpsf2O35218 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.09■□□□□ 0.33
Cpsf2O35218 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.09■□□□□ 0.33
Cpsf2O35218 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cpsf2O35218 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf2O35218 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf2O35218 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf2O35218 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cpsf2O35218 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf2O35218 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf2O35218 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cpsf2O35218 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf2O35218 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf2O35218 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf2O35218 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf2O35218 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cpsf2O35218 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf2O35218 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf2O35218 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.09■□□□□ 0.33
Cpsf2O35218 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf2O35218 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf2O35218 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpsf2O35218 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpsf2O35218 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpsf2O35218 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpsf2O35218 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpsf2O35218 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf2O35218 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf2O35218 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf2O35218 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.08■□□□□ 0.32
Cpsf2O35218 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf2O35218 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf2O35218 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf2O35218 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cpsf2O35218 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf2O35218 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf2O35218 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf2O35218 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf2O35218 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf2O35218 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf2O35218 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf2O35218 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.08■□□□□ 0.32
Cpsf2O35218 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.07■□□□□ 0.32
Cpsf2O35218 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.07■□□□□ 0.32
Cpsf2O35218 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Cpsf2O35218 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.07■□□□□ 0.32
Cpsf2O35218 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf2O35218 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms