Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col15a1O35206 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col15a1O35206 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col15a1O35206 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col15a1O35206 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col15a1O35206 Gm13216-201ENSMUST00000117145 591 ntBASIC20.35■□□□□ 0.85
Col15a1O35206 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC20.35■□□□□ 0.85
Col15a1O35206 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col15a1O35206 Gm18246-201ENSMUST00000221023 728 ntBASIC20.35■□□□□ 0.85
Col15a1O35206 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col15a1O35206 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Col15a1O35206 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col15a1O35206 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col15a1O35206 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col15a1O35206 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Col15a1O35206 Haglr-201ENSMUST00000100000 2085 ntBASIC20.35■□□□□ 0.85
Col15a1O35206 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.35■□□□□ 0.85
Col15a1O35206 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col15a1O35206 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col15a1O35206 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col15a1O35206 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Col15a1O35206 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col15a1O35206 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col15a1O35206 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC20.34■□□□□ 0.85
Col15a1O35206 Thap2-203ENSMUST00000218989 527 ntBASIC20.34■□□□□ 0.85
Col15a1O35206 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col15a1O35206 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC20.34■□□□□ 0.85
Col15a1O35206 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col15a1O35206 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col15a1O35206 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col15a1O35206 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col15a1O35206 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col15a1O35206 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col15a1O35206 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col15a1O35206 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col15a1O35206 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col15a1O35206 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col15a1O35206 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col15a1O35206 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Col15a1O35206 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col15a1O35206 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col15a1O35206 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col15a1O35206 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col15a1O35206 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Col15a1O35206 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Col15a1O35206 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col15a1O35206 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Col15a1O35206 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col15a1O35206 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col15a1O35206 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col15a1O35206 AA543401-201ENSMUST00000164248 1269 ntBASIC20.33■□□□□ 0.84
Col15a1O35206 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Col15a1O35206 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col15a1O35206 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col15a1O35206 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.33■□□□□ 0.84
Col15a1O35206 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col15a1O35206 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col15a1O35206 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Col15a1O35206 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC20.32■□□□□ 0.84
Col15a1O35206 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Col15a1O35206 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col15a1O35206 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col15a1O35206 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col15a1O35206 Rpph1-201ENSMUST00000175096 319 ntBASIC20.32■□□□□ 0.84
Col15a1O35206 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC20.32■□□□□ 0.84
Col15a1O35206 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Col15a1O35206 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Col15a1O35206 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col15a1O35206 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col15a1O35206 Gm5184-201ENSMUST00000220417 1702 ntBASIC20.31■□□□□ 0.84
Col15a1O35206 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col15a1O35206 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col15a1O35206 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col15a1O35206 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.31■□□□□ 0.84
Col15a1O35206 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Col15a1O35206 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col15a1O35206 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Col15a1O35206 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col15a1O35206 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col15a1O35206 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Col15a1O35206 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col15a1O35206 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC20.31■□□□□ 0.84
Col15a1O35206 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC20.31■□□□□ 0.84
Col15a1O35206 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC20.31■□□□□ 0.84
Col15a1O35206 Mir6990-201ENSMUST00000183724 91 ntBASIC20.31■□□□□ 0.84
Col15a1O35206 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Col15a1O35206 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col15a1O35206 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col15a1O35206 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col15a1O35206 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col15a1O35206 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Col15a1O35206 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col15a1O35206 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col15a1O35206 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col15a1O35206 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Col15a1O35206 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col15a1O35206 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col15a1O35206 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col15a1O35206 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col15a1O35206 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms