Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2b3O09039 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2b3O09039 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2b3O09039 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2b3O09039 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2b3O09039 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2b3O09039 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.19□□□□□ -0.14
Sh2b3O09039 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2b3O09039 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2b3O09039 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.19□□□□□ -0.14
Sh2b3O09039 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.19□□□□□ -0.14
Sh2b3O09039 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2b3O09039 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2b3O09039 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sh2b3O09039 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2b3O09039 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.19□□□□□ -0.14
Sh2b3O09039 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2b3O09039 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2b3O09039 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Sh2b3O09039 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.19□□□□□ -0.14
Sh2b3O09039 Gm13312-201ENSMUST00000119631 718 ntBASIC14.19□□□□□ -0.14
Sh2b3O09039 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.19□□□□□ -0.14
Sh2b3O09039 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.19□□□□□ -0.14
Sh2b3O09039 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.19□□□□□ -0.14
Sh2b3O09039 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.19□□□□□ -0.14
Sh2b3O09039 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.19□□□□□ -0.14
Sh2b3O09039 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.19□□□□□ -0.14
Sh2b3O09039 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.19□□□□□ -0.14
Sh2b3O09039 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2b3O09039 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2b3O09039 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2b3O09039 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2b3O09039 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.19□□□□□ -0.14
Sh2b3O09039 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2b3O09039 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2b3O09039 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2b3O09039 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2b3O09039 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2b3O09039 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sh2b3O09039 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2b3O09039 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sh2b3O09039 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2b3O09039 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.18□□□□□ -0.14
Sh2b3O09039 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.18□□□□□ -0.14
Sh2b3O09039 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.18□□□□□ -0.14
Sh2b3O09039 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sh2b3O09039 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.18□□□□□ -0.14
Sh2b3O09039 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sh2b3O09039 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.18□□□□□ -0.14
Sh2b3O09039 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Sh2b3O09039 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sh2b3O09039 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2b3O09039 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Sh2b3O09039 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2b3O09039 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2b3O09039 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2b3O09039 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.17□□□□□ -0.14
Sh2b3O09039 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2b3O09039 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2b3O09039 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2b3O09039 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2b3O09039 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2b3O09039 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2b3O09039 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2b3O09039 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2b3O09039 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2b3O09039 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2b3O09039 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.17□□□□□ -0.14
Sh2b3O09039 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2b3O09039 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.17□□□□□ -0.14
Sh2b3O09039 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2b3O09039 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2b3O09039 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.17□□□□□ -0.14
Sh2b3O09039 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.17□□□□□ -0.14
Sh2b3O09039 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2b3O09039 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Sh2b3O09039 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sh2b3O09039 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2b3O09039 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms