Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pkd1O08852 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.8
Pkd1O08852 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Pkd1O08852 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Pkd1O08852 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Pkd1O08852 Gm6973-201ENSMUST00000117080 721 ntBASIC10.02□□□□□ -0.8
Pkd1O08852 Gm14928-201ENSMUST00000120198 477 ntBASIC10.02□□□□□ -0.8
Pkd1O08852 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.8
Pkd1O08852 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Pkd1O08852 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Pkd1O08852 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Pkd1O08852 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Pkd1O08852 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Pkd1O08852 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Pkd1O08852 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Pkd1O08852 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pkd1O08852 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC10.02□□□□□ -0.81
Pkd1O08852 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pkd1O08852 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pkd1O08852 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Pkd1O08852 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Pkd1O08852 Gm25144-201ENSMUST00000179561 110 ntBASIC10.02□□□□□ -0.81
Pkd1O08852 Gm25352-201ENSMUST00000179815 110 ntBASIC10.02□□□□□ -0.81
Pkd1O08852 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC10.02□□□□□ -0.81
Pkd1O08852 CT025555.1-201ENSMUST00000225901 1217 ntBASIC10.02□□□□□ -0.81
Pkd1O08852 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pkd1O08852 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pkd1O08852 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Pkd1O08852 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Pkd1O08852 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Pkd1O08852 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Pkd1O08852 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC10.02□□□□□ -0.81
Pkd1O08852 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC10.02□□□□□ -0.81
Pkd1O08852 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.02□□□□□ -0.81
Pkd1O08852 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pkd1O08852 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Pkd1O08852 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pkd1O08852 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pkd1O08852 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Pkd1O08852 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.02□□□□□ -0.81
Pkd1O08852 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Pkd1O08852 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC10.02□□□□□ -0.81
Pkd1O08852 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pkd1O08852 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pkd1O08852 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pkd1O08852 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Pkd1O08852 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Pkd1O08852 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pkd1O08852 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Pkd1O08852 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pkd1O08852 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pkd1O08852 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pkd1O08852 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pkd1O08852 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pkd1O08852 Gm43338-201ENSMUST00000198617 2223 ntBASIC10.01□□□□□ -0.81
Pkd1O08852 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Pkd1O08852 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Pkd1O08852 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pkd1O08852 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pkd1O08852 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.01□□□□□ -0.81
Pkd1O08852 Gm24158-201ENSMUST00000175263 71 ntBASIC10.01□□□□□ -0.81
Pkd1O08852 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pkd1O08852 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pkd1O08852 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pkd1O08852 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pkd1O08852 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Pkd1O08852 Grk6-207ENSMUST00000225925 2769 ntBASIC10.01□□□□□ -0.81
Pkd1O08852 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pkd1O08852 AC025913.2-201ENSMUST00000220136 1766 ntBASIC10.01□□□□□ -0.81
Pkd1O08852 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pkd1O08852 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Pkd1O08852 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC10.01□□□□□ -0.81
Pkd1O08852 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pkd1O08852 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pkd1O08852 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC10□□□□□ -0.81
Pkd1O08852 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Pkd1O08852 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Pkd1O08852 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Pkd1O08852 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Pkd1O08852 Gm11453-201ENSMUST00000117318 1007 ntBASIC10□□□□□ -0.81
Pkd1O08852 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10□□□□□ -0.81
Pkd1O08852 Gm7730-201ENSMUST00000212486 454 ntBASIC10□□□□□ -0.81
Pkd1O08852 AC154239.3-201ENSMUST00000226933 674 ntBASIC10□□□□□ -0.81
Pkd1O08852 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC10□□□□□ -0.81
Pkd1O08852 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Pkd1O08852 Gm37811-201ENSMUST00000192416 2601 ntBASIC10□□□□□ -0.81
Pkd1O08852 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC10□□□□□ -0.81
Pkd1O08852 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
Pkd1O08852 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Pkd1O08852 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC10□□□□□ -0.81
Pkd1O08852 AC151836.1-202ENSMUST00000226259 753 ntBASIC10□□□□□ -0.81
Pkd1O08852 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC10□□□□□ -0.81
Pkd1O08852 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10□□□□□ -0.81
Pkd1O08852 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10□□□□□ -0.81
Pkd1O08852 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10□□□□□ -0.81
Pkd1O08852 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC9.99□□□□□ -0.81
Pkd1O08852 Gm12017-201ENSMUST00000122453 1003 ntBASIC9.99□□□□□ -0.81
Pkd1O08852 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC9.99□□□□□ -0.81
Pkd1O08852 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Pkd1O08852 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms