Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.43■□□□□ 0.22
Trove2O08848 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trove2O08848 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.43■□□□□ 0.22
Trove2O08848 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trove2O08848 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trove2O08848 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trove2O08848 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trove2O08848 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trove2O08848 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trove2O08848 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trove2O08848 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.43■□□□□ 0.22
Trove2O08848 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trove2O08848 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trove2O08848 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trove2O08848 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trove2O08848 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.42■□□□□ 0.22
Trove2O08848 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.42■□□□□ 0.22
Trove2O08848 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
Trove2O08848 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.42■□□□□ 0.22
Trove2O08848 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.42■□□□□ 0.22
Trove2O08848 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.42■□□□□ 0.22
Trove2O08848 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Gm5417-201ENSMUST00000079706 384 ntBASIC16.42■□□□□ 0.22
Trove2O08848 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Trove2O08848 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trove2O08848 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Trove2O08848 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trove2O08848 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trove2O08848 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trove2O08848 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trove2O08848 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.41■□□□□ 0.22
Trove2O08848 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trove2O08848 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trove2O08848 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trove2O08848 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trove2O08848 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trove2O08848 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.41■□□□□ 0.22
Trove2O08848 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trove2O08848 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trove2O08848 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trove2O08848 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.41■□□□□ 0.22
Trove2O08848 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trove2O08848 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.41■□□□□ 0.22
Trove2O08848 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trove2O08848 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trove2O08848 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.41■□□□□ 0.22
Trove2O08848 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Trove2O08848 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trove2O08848 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trove2O08848 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trove2O08848 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trove2O08848 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trove2O08848 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trove2O08848 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trove2O08848 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trove2O08848 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trove2O08848 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.41■□□□□ 0.22
Trove2O08848 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.4■□□□□ 0.22
Trove2O08848 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Trove2O08848 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Trove2O08848 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trove2O08848 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.4■□□□□ 0.22
Trove2O08848 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms