Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.3■□□□□ 0.36
Ube3aO08759 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3aO08759 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.3■□□□□ 0.36
Ube3aO08759 Gm3375-201ENSMUST00000203929 796 ntBASIC17.3■□□□□ 0.36
Ube3aO08759 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3aO08759 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.3■□□□□ 0.36
Ube3aO08759 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3aO08759 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Ube3aO08759 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ube3aO08759 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3aO08759 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3aO08759 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube3aO08759 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Ube3aO08759 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Ube3aO08759 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ube3aO08759 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.29■□□□□ 0.36
Ube3aO08759 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.29■□□□□ 0.36
Ube3aO08759 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.29■□□□□ 0.36
Ube3aO08759 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ube3aO08759 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 Gm27463-201ENSMUST00000183569 57 ntBASIC17.29■□□□□ 0.36
Ube3aO08759 Gm18421-201ENSMUST00000204122 625 ntBASIC17.29■□□□□ 0.36
Ube3aO08759 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Ube3aO08759 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube3aO08759 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Ube3aO08759 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ube3aO08759 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ube3aO08759 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.28■□□□□ 0.36
Ube3aO08759 Gm13836-201ENSMUST00000121159 501 ntBASIC17.28■□□□□ 0.36
Ube3aO08759 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.28■□□□□ 0.36
Ube3aO08759 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ube3aO08759 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ube3aO08759 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube3aO08759 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ube3aO08759 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ube3aO08759 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ube3aO08759 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ube3aO08759 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ube3aO08759 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Ube3aO08759 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Ube3aO08759 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ube3aO08759 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.27■□□□□ 0.36
Ube3aO08759 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ube3aO08759 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.27■□□□□ 0.35
Ube3aO08759 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ube3aO08759 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ube3aO08759 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ube3aO08759 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ube3aO08759 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ube3aO08759 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ube3aO08759 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ube3aO08759 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ube3aO08759 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.26■□□□□ 0.35
Ube3aO08759 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms