Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh11xF6ZNL5 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh11xF6ZNL5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh11xF6ZNL5 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdh11xF6ZNL5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdh11xF6ZNL5 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdh11xF6ZNL5 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdh11xF6ZNL5 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.42
Pcdh11xF6ZNL5 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Gm6257-201ENSMUST00000163864 910 ntBASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh11xF6ZNL5 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Pcdh11xF6ZNL5 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh11xF6ZNL5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh11xF6ZNL5 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh11xF6ZNL5 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh11xF6ZNL5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh11xF6ZNL5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh11xF6ZNL5 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh11xF6ZNL5 Gm7153-201ENSMUST00000117092 455 ntBASIC17.63■□□□□ 0.41
Pcdh11xF6ZNL5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.63■□□□□ 0.41
Pcdh11xF6ZNL5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh11xF6ZNL5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh11xF6ZNL5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh11xF6ZNL5 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh11xF6ZNL5 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh11xF6ZNL5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh11xF6ZNL5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh11xF6ZNL5 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 App-207ENSMUST00000227737 2827 ntBASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Olfr129-201ENSMUST00000122318 993 ntBASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh11xF6ZNL5 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms