Protein–RNA interactions for Protein: F6R3J9

Gm8879, Predicted gene 8879, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm8879F6R3J9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm8879F6R3J9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm8879F6R3J9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm8879F6R3J9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm8879F6R3J9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Gm8879F6R3J9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm8879F6R3J9 Gm10812-201ENSMUST00000099864 546 ntBASIC15.3■□□□□ 0.04
Gm8879F6R3J9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm8879F6R3J9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Gm8879F6R3J9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Gm8879F6R3J9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Gm2274-201ENSMUST00000184539 609 ntBASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Gm29707-201ENSMUST00000196325 491 ntBASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm8879F6R3J9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Gm29257-201ENSMUST00000186115 639 ntBASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Gm7370-201ENSMUST00000219471 767 ntBASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm8879F6R3J9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Gm11336-201ENSMUST00000118168 334 ntBASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Gm8879F6R3J9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.27■□□□□ 0.03
Gm8879F6R3J9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Gm8879F6R3J9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Gm8879F6R3J9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm8879F6R3J9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms