Protein–RNA interactions for Protein: E9Q4E0

5031410I06Rik, RIKEN cDNA 5031410I06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5031410I06RikE9Q4E0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
5031410I06RikE9Q4E0 Gm9682-201ENSMUST00000197505 556 ntBASIC20.3■□□□□ 0.84
5031410I06RikE9Q4E0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
5031410I06RikE9Q4E0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
5031410I06RikE9Q4E0 Gm7787-201ENSMUST00000216858 688 ntBASIC20.3■□□□□ 0.84
5031410I06RikE9Q4E0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
5031410I06RikE9Q4E0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
5031410I06RikE9Q4E0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
5031410I06RikE9Q4E0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
5031410I06RikE9Q4E0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
5031410I06RikE9Q4E0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
5031410I06RikE9Q4E0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
5031410I06RikE9Q4E0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
5031410I06RikE9Q4E0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
5031410I06RikE9Q4E0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20.29■□□□□ 0.84
5031410I06RikE9Q4E0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
5031410I06RikE9Q4E0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
5031410I06RikE9Q4E0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
5031410I06RikE9Q4E0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC20.29■□□□□ 0.84
5031410I06RikE9Q4E0 Gm14701-201ENSMUST00000117156 348 ntBASIC20.29■□□□□ 0.84
5031410I06RikE9Q4E0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC20.29■□□□□ 0.84
5031410I06RikE9Q4E0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC20.29■□□□□ 0.84
5031410I06RikE9Q4E0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
5031410I06RikE9Q4E0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
5031410I06RikE9Q4E0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
5031410I06RikE9Q4E0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
5031410I06RikE9Q4E0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
5031410I06RikE9Q4E0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
5031410I06RikE9Q4E0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
5031410I06RikE9Q4E0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
5031410I06RikE9Q4E0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
5031410I06RikE9Q4E0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
5031410I06RikE9Q4E0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.28■□□□□ 0.84
5031410I06RikE9Q4E0 Gm13597-201ENSMUST00000121239 375 ntBASIC20.28■□□□□ 0.84
5031410I06RikE9Q4E0 Gm44492-201ENSMUST00000197012 141 ntBASIC20.28■□□□□ 0.84
5031410I06RikE9Q4E0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
5031410I06RikE9Q4E0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC20.28■□□□□ 0.84
5031410I06RikE9Q4E0 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.28■□□□□ 0.84
5031410I06RikE9Q4E0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
5031410I06RikE9Q4E0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 Gm17968-201ENSMUST00000194902 784 ntBASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 AC154572.2-201ENSMUST00000225105 997 ntBASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 AC124549.3-201ENSMUST00000225541 367 ntBASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 AC151836.1-202ENSMUST00000226259 753 ntBASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
5031410I06RikE9Q4E0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
5031410I06RikE9Q4E0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
5031410I06RikE9Q4E0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
5031410I06RikE9Q4E0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
5031410I06RikE9Q4E0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.27■□□□□ 0.83
5031410I06RikE9Q4E0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
5031410I06RikE9Q4E0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
5031410I06RikE9Q4E0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
5031410I06RikE9Q4E0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
5031410I06RikE9Q4E0 Gm7063-201ENSMUST00000186840 981 ntBASIC20.26■□□□□ 0.83
5031410I06RikE9Q4E0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
5031410I06RikE9Q4E0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
5031410I06RikE9Q4E0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
5031410I06RikE9Q4E0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
5031410I06RikE9Q4E0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
5031410I06RikE9Q4E0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
5031410I06RikE9Q4E0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
5031410I06RikE9Q4E0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
5031410I06RikE9Q4E0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
5031410I06RikE9Q4E0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
5031410I06RikE9Q4E0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
5031410I06RikE9Q4E0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
5031410I06RikE9Q4E0 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.25■□□□□ 0.83
5031410I06RikE9Q4E0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
5031410I06RikE9Q4E0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
5031410I06RikE9Q4E0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
5031410I06RikE9Q4E0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
5031410I06RikE9Q4E0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
5031410I06RikE9Q4E0 Gm19164-201ENSMUST00000210667 640 ntBASIC20.25■□□□□ 0.83
5031410I06RikE9Q4E0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.25■□□□□ 0.83
5031410I06RikE9Q4E0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
5031410I06RikE9Q4E0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
5031410I06RikE9Q4E0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
5031410I06RikE9Q4E0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
5031410I06RikE9Q4E0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
5031410I06RikE9Q4E0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC20.25■□□□□ 0.83
5031410I06RikE9Q4E0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
5031410I06RikE9Q4E0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
5031410I06RikE9Q4E0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
5031410I06RikE9Q4E0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
5031410I06RikE9Q4E0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms