Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Gm12895-201ENSMUST00000122214 226 ntBASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpsf4lE9Q2N0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cpsf4lE9Q2N0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpsf4lE9Q2N0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpsf4lE9Q2N0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpsf4lE9Q2N0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpsf4lE9Q2N0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Gm15165-201ENSMUST00000118140 502 ntBASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Gm15372-201ENSMUST00000120729 834 ntBASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Gm25406-201ENSMUST00000157599 105 ntBASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Gm27867-201ENSMUST00000184778 125 ntBASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4lE9Q2N0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Gm28033-201ENSMUST00000184224 96 ntBASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Gm10819-201ENSMUST00000099988 561 ntBASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4lE9Q2N0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Gm9103-201ENSMUST00000119371 405 ntBASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms