Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Hfm1D3Z4R1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC22.28■■□□□ 1.16
Hfm1D3Z4R1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC22.28■■□□□ 1.16
Hfm1D3Z4R1 Gm36858-201ENSMUST00000194501 2391 ntBASIC22.28■■□□□ 1.16
Hfm1D3Z4R1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Hfm1D3Z4R1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Hfm1D3Z4R1 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Hfm1D3Z4R1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hfm1D3Z4R1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Hfm1D3Z4R1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Hfm1D3Z4R1 Gm27437-201ENSMUST00000183429 107 ntBASIC22.28■■□□□ 1.16
Hfm1D3Z4R1 Mir6977-201ENSMUST00000184960 64 ntBASIC22.28■■□□□ 1.16
Hfm1D3Z4R1 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Hfm1D3Z4R1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Hfm1D3Z4R1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Hfm1D3Z4R1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hfm1D3Z4R1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Hfm1D3Z4R1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hfm1D3Z4R1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hfm1D3Z4R1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hfm1D3Z4R1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hfm1D3Z4R1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hfm1D3Z4R1 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC22.27■■□□□ 1.16
Hfm1D3Z4R1 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Hfm1D3Z4R1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC22.27■■□□□ 1.16
Hfm1D3Z4R1 AC131710.1-201ENSMUST00000228336 990 ntBASIC22.27■■□□□ 1.16
Hfm1D3Z4R1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hfm1D3Z4R1 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hfm1D3Z4R1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hfm1D3Z4R1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Hfm1D3Z4R1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Hfm1D3Z4R1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 Gm6018-201ENSMUST00000216090 1306 ntBASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
Hfm1D3Z4R1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hfm1D3Z4R1 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hfm1D3Z4R1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC22.25■■□□□ 1.15
Hfm1D3Z4R1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Hfm1D3Z4R1 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC22.25■■□□□ 1.15
Hfm1D3Z4R1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC22.25■■□□□ 1.15
Hfm1D3Z4R1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hfm1D3Z4R1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hfm1D3Z4R1 Gm16401-202ENSMUST00000197463 2074 ntBASIC22.25■■□□□ 1.15
Hfm1D3Z4R1 Gm42900-201ENSMUST00000197184 2167 ntBASIC22.25■■□□□ 1.15
Hfm1D3Z4R1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hfm1D3Z4R1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hfm1D3Z4R1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hfm1D3Z4R1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hfm1D3Z4R1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hfm1D3Z4R1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hfm1D3Z4R1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC22.25■■□□□ 1.15
Hfm1D3Z4R1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hfm1D3Z4R1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Gm13223-201ENSMUST00000118609 747 ntBASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Gm27430-201ENSMUST00000184585 107 ntBASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Gm44333-201ENSMUST00000197168 107 ntBASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 AC125206.2-201ENSMUST00000217454 574 ntBASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hfm1D3Z4R1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 Gm24158-201ENSMUST00000175263 71 ntBASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
Hfm1D3Z4R1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms