Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccnb1ip1D3Z3K2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Gm15375-201ENSMUST00000119510 849 ntBASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Gm7291-201ENSMUST00000199147 382 ntBASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Gm7514-201ENSMUST00000209475 934 ntBASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccnb1ip1D3Z3K2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.49□□□□□ -0.09
Ccnb1ip1D3Z3K2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccnb1ip1D3Z3K2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ccnb1ip1D3Z3K2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccnb1ip1D3Z3K2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Ccnb1ip1D3Z3K2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ccnb1ip1D3Z3K2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccnb1ip1D3Z3K2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccnb1ip1D3Z3K2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Ccnb1ip1D3Z3K2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccnb1ip1D3Z3K2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccnb1ip1D3Z3K2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Ccnb1ip1D3Z3K2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.48□□□□□ -0.09
Ccnb1ip1D3Z3K2 Gm37025-201ENSMUST00000195159 829 ntBASIC14.48□□□□□ -0.09
Ccnb1ip1D3Z3K2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccnb1ip1D3Z3K2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccnb1ip1D3Z3K2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccnb1ip1D3Z3K2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccnb1ip1D3Z3K2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms