Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc22a28B2RT89 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc22a28B2RT89 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc22a28B2RT89 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc22a28B2RT89 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc22a28B2RT89 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc22a28B2RT89 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc22a28B2RT89 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc22a28B2RT89 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Slc22a28B2RT89 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc22a28B2RT89 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc22a28B2RT89 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Gm27389-201ENSMUST00000183622 195 ntBASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Gm18959-201ENSMUST00000208954 655 ntBASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc22a28B2RT89 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Gm10052-201ENSMUST00000168019 960 ntBASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Gm37722-201ENSMUST00000193757 208 ntBASIC14.74□□□□□ -0.05
Slc22a28B2RT89 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.74□□□□□ -0.05
Slc22a28B2RT89 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Gm7729-201ENSMUST00000050143 801 ntBASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc22a28B2RT89 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Slc22a28B2RT89 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Slc22a28B2RT89 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Slc22a28B2RT89 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.72□□□□□ -0.05
Slc22a28B2RT89 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Slc22a28B2RT89 Gm7889-201ENSMUST00000185591 958 ntBASIC14.72□□□□□ -0.05
Slc22a28B2RT89 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Slc22a28B2RT89 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms