Protein–RNA interactions for Protein: B1AUC4

Ube2u, Ubiquitin-conjugating enzyme E2U (putative), mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2uB1AUC4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ube2uB1AUC4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC23.77■■□□□ 1.4
Ube2uB1AUC4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC23.77■■□□□ 1.4
Ube2uB1AUC4 Rps4l-201ENSMUST00000071745 943 ntBASIC23.77■■□□□ 1.4
Ube2uB1AUC4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ube2uB1AUC4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ube2uB1AUC4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ube2uB1AUC4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Ube2uB1AUC4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC23.77■■□□□ 1.4
Ube2uB1AUC4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ube2uB1AUC4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
Ube2uB1AUC4 Gm26596-201ENSMUST00000180464 2655 ntBASIC23.77■■□□□ 1.39
Ube2uB1AUC4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
Ube2uB1AUC4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube2uB1AUC4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ube2uB1AUC4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube2uB1AUC4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube2uB1AUC4 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC23.76■■□□□ 1.39
Ube2uB1AUC4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube2uB1AUC4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube2uB1AUC4 Gm6296-201ENSMUST00000222599 943 ntBASIC23.76■■□□□ 1.39
Ube2uB1AUC4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube2uB1AUC4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube2uB1AUC4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube2uB1AUC4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube2uB1AUC4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube2uB1AUC4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube2uB1AUC4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Ube2uB1AUC4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube2uB1AUC4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube2uB1AUC4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube2uB1AUC4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube2uB1AUC4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube2uB1AUC4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ube2uB1AUC4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ube2uB1AUC4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC23.75■■□□□ 1.39
Ube2uB1AUC4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC23.75■■□□□ 1.39
Ube2uB1AUC4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC23.75■■□□□ 1.39
Ube2uB1AUC4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube2uB1AUC4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC23.75■■□□□ 1.39
Ube2uB1AUC4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ube2uB1AUC4 Gm18856-201ENSMUST00000178096 1374 ntBASIC23.75■■□□□ 1.39
Ube2uB1AUC4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ube2uB1AUC4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube2uB1AUC4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Gm42900-201ENSMUST00000197184 2167 ntBASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Gm13830-205ENSMUST00000201195 1155 ntBASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Gm18195-201ENSMUST00000207604 706 ntBASIC23.74■■□□□ 1.39
Ube2uB1AUC4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube2uB1AUC4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Ube2uB1AUC4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Gm37102-201ENSMUST00000195740 1105 ntBASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Gm44357-201ENSMUST00000195897 142 ntBASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Gm19658-201ENSMUST00000196231 138 ntBASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Gm44367-201ENSMUST00000196836 138 ntBASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Gm44350-201ENSMUST00000197197 138 ntBASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Gm44390-201ENSMUST00000197533 144 ntBASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Gm44313-201ENSMUST00000198018 138 ntBASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Gm44486-201ENSMUST00000198508 138 ntBASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Gm44314-201ENSMUST00000199263 138 ntBASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Gm44394-201ENSMUST00000199558 138 ntBASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Gm44484-201ENSMUST00000199873 138 ntBASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Gm44466-201ENSMUST00000200264 138 ntBASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Gm44359-201ENSMUST00000200671 138 ntBASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Gm8839-201ENSMUST00000121279 1645 ntBASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ube2uB1AUC4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms