Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC33.16■■■□□ 2.9
Gm35339A0A140LHH9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC33.16■■■□□ 2.9
Gm35339A0A140LHH9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
Gm35339A0A140LHH9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Gm35339A0A140LHH9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
Gm35339A0A140LHH9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Gm35339A0A140LHH9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC33.15■■■□□ 2.9
Gm35339A0A140LHH9 Gm25144-201ENSMUST00000179561 110 ntBASIC33.15■■■□□ 2.9
Gm35339A0A140LHH9 Gm25352-201ENSMUST00000179815 110 ntBASIC33.15■■■□□ 2.9
Gm35339A0A140LHH9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC33.15■■■□□ 2.9
Gm35339A0A140LHH9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC33.15■■■□□ 2.9
Gm35339A0A140LHH9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC33.15■■■□□ 2.9
Gm35339A0A140LHH9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC33.15■■■□□ 2.9
Gm35339A0A140LHH9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC33.15■■■□□ 2.9
Gm35339A0A140LHH9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Gm35339A0A140LHH9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Gm35339A0A140LHH9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
Gm35339A0A140LHH9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC33.14■■■□□ 2.9
Gm35339A0A140LHH9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Gm35339A0A140LHH9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC33.14■■■□□ 2.9
Gm35339A0A140LHH9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
Gm35339A0A140LHH9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Gm35339A0A140LHH9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Gm35339A0A140LHH9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC33.13■■■□□ 2.89
Gm35339A0A140LHH9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC33.13■■■□□ 2.89
Gm35339A0A140LHH9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC33.13■■■□□ 2.89
Gm35339A0A140LHH9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
Gm35339A0A140LHH9 Gm13216-201ENSMUST00000117145 591 ntBASIC33.13■■■□□ 2.89
Gm35339A0A140LHH9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Gm35339A0A140LHH9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC33.12■■■□□ 2.89
Gm35339A0A140LHH9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC33.12■■■□□ 2.89
Gm35339A0A140LHH9 Gm7775-201ENSMUST00000218871 853 ntBASIC33.12■■■□□ 2.89
Gm35339A0A140LHH9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC33.12■■■□□ 2.89
Gm35339A0A140LHH9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Gm35339A0A140LHH9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
Gm35339A0A140LHH9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Gm35339A0A140LHH9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC33.11■■■□□ 2.89
Gm35339A0A140LHH9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC33.11■■■□□ 2.89
Gm35339A0A140LHH9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Gm35339A0A140LHH9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
Gm35339A0A140LHH9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC33.11■■■□□ 2.89
Gm35339A0A140LHH9 Gm10499-201ENSMUST00000174094 934 ntBASIC33.11■■■□□ 2.89
Gm35339A0A140LHH9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC33.11■■■□□ 2.89
Gm35339A0A140LHH9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC33.11■■■□□ 2.89
Gm35339A0A140LHH9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Gm35339A0A140LHH9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC33.11■■■□□ 2.89
Gm35339A0A140LHH9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Gm35339A0A140LHH9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Gm35339A0A140LHH9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
Gm35339A0A140LHH9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC33.1■■■□□ 2.89
Gm35339A0A140LHH9 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC33.1■■■□□ 2.89
Gm35339A0A140LHH9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
Gm35339A0A140LHH9 Gm18737-201ENSMUST00000173594 937 ntBASIC33.1■■■□□ 2.89
Gm35339A0A140LHH9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC33.1■■■□□ 2.89
Gm35339A0A140LHH9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC33.1■■■□□ 2.89
Gm35339A0A140LHH9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
Gm35339A0A140LHH9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Gm35339A0A140LHH9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Gm35339A0A140LHH9 Gm36858-201ENSMUST00000194501 2391 ntBASIC33.09■■■□□ 2.89
Gm35339A0A140LHH9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC33.09■■■□□ 2.89
Gm35339A0A140LHH9 Haglr-201ENSMUST00000100000 2085 ntBASIC33.09■■■□□ 2.89
Gm35339A0A140LHH9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Gm35339A0A140LHH9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Gm35339A0A140LHH9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC33.09■■■□□ 2.89
Gm35339A0A140LHH9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC33.09■■■□□ 2.89
Gm35339A0A140LHH9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Gm35339A0A140LHH9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC33.09■■■□□ 2.89
Gm35339A0A140LHH9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC33.09■■■□□ 2.89
Gm35339A0A140LHH9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC33.08■■■□□ 2.89
Gm35339A0A140LHH9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Gm35339A0A140LHH9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC33.08■■■□□ 2.89
Gm35339A0A140LHH9 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
Gm35339A0A140LHH9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Gm35339A0A140LHH9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC33.08■■■□□ 2.89
Gm35339A0A140LHH9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC33.07■■■□□ 2.89
Gm35339A0A140LHH9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC33.07■■■□□ 2.88
Gm35339A0A140LHH9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Gm35339A0A140LHH9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC33.07■■■□□ 2.88
Gm35339A0A140LHH9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC33.07■■■□□ 2.88
Gm35339A0A140LHH9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Gm35339A0A140LHH9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC33.07■■■□□ 2.88
Gm35339A0A140LHH9 AC160980.1-201ENSMUST00000224136 970 ntBASIC33.07■■■□□ 2.88
Gm35339A0A140LHH9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC33.07■■■□□ 2.88
Gm35339A0A140LHH9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Gm35339A0A140LHH9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Gm35339A0A140LHH9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC33.06■■■□□ 2.88
Gm35339A0A140LHH9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC33.06■■■□□ 2.88
Gm35339A0A140LHH9 Gm14722-201ENSMUST00000118943 689 ntBASIC33.06■■■□□ 2.88
Gm35339A0A140LHH9 Gm9824-201ENSMUST00000178707 561 ntBASIC33.06■■■□□ 2.88
Gm35339A0A140LHH9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
Gm35339A0A140LHH9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Gm35339A0A140LHH9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Gm35339A0A140LHH9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Gm35339A0A140LHH9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Gm35339A0A140LHH9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Gm35339A0A140LHH9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC33.06■■■□□ 2.88
Gm35339A0A140LHH9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
Gm35339A0A140LHH9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC33.06■■■□□ 2.88
Gm35339A0A140LHH9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC33.06■■■□□ 2.88
Gm35339A0A140LHH9 Gm15487-201ENSMUST00000122373 465 ntBASIC33.06■■■□□ 2.88
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms