Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.02□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10052-201ENSMUST00000168019 960 ntBASIC14.02□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm22697-201ENSMUST00000175194 63 ntBASIC14.02□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7729-201ENSMUST00000050143 801 ntBASIC14.02□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15565-201ENSMUST00000118890 427 ntBASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm18101-201ENSMUST00000215769 548 ntBASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6433-201ENSMUST00000118634 875 ntBASIC13.99□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.98□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms