Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Gm15039-201ENSMUST00000118914 875 ntBASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 AC164629.5-201ENSMUST00000220387 632 ntBASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9d-4A0A0G2JG37 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm18958-201ENSMUST00000174258 762 ntBASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Ntrk2-205ENSMUST00000224402 2284 ntBASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9d-4A0A0G2JG37 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm18666-201ENSMUST00000190039 958 ntBASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9d-4A0A0G2JG37 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9d-4A0A0G2JG37 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9d-4A0A0G2JG37 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9d-4A0A0G2JG37 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9d-4A0A0G2JG37 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9d-4A0A0G2JG37 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav9d-4A0A0G2JG37 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms