Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.02□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13d-4A0A0G2JFX3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm715-201ENSMUST00000117865 831 ntBASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm13186-201ENSMUST00000118031 316 ntBASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms