Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv4-53A0A0G2JFC6 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.31□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Gm18032-201ENSMUST00000222541 538 ntBASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Gm37722-201ENSMUST00000193757 208 ntBASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv4-53A0A0G2JFC6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.28□□□□□ -0.6
Igkv4-53A0A0G2JFC6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms