Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-27A0A0G2JF28 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-27A0A0G2JF28 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-27A0A0G2JF28 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-27A0A0G2JF28 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC10.07□□□□□ -0.8
Igkv8-27A0A0G2JF28 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-27A0A0G2JF28 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-27A0A0G2JF28 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC10.07□□□□□ -0.8
Igkv8-27A0A0G2JF28 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-27A0A0G2JF28 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-27A0A0G2JF28 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-27A0A0G2JF28 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-27A0A0G2JF28 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-27A0A0G2JF28 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-27A0A0G2JF28 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Igkv8-27A0A0G2JF28 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-27A0A0G2JF28 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Mir6349-201ENSMUST00000184059 97 ntBASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-27A0A0G2JF28 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Igkv8-27A0A0G2JF28 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms