Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4-3A0A0B4J1K1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 AC099934.2-201ENSMUST00000196389 70 ntBASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 AC156953.1-201ENSMUST00000196953 70 ntBASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 AC157822.2-201ENSMUST00000200291 70 ntBASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Rab3c-203ENSMUST00000224180 967 ntBASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm10493-201ENSMUST00000097270 612 ntBASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav4-3A0A0B4J1K1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Actl10-202ENSMUST00000226583 1501 ntBASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm18958-201ENSMUST00000174258 762 ntBASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm9694-201ENSMUST00000193347 1189 ntBASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm9731-201ENSMUST00000209480 747 ntBASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms