Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trbv19A0A0B4J1H4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv19A0A0B4J1H4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trbv19A0A0B4J1H4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv19A0A0B4J1H4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv19A0A0B4J1H4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv19A0A0B4J1H4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trbv19A0A0B4J1H4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv19A0A0B4J1H4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.85□□□□□ -0.35
Trbv19A0A0B4J1H4 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv19A0A0B4J1H4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv19A0A0B4J1H4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv19A0A0B4J1H4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv19A0A0B4J1H4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv19A0A0B4J1H4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv19A0A0B4J1H4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv19A0A0B4J1H4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv19A0A0B4J1H4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trbv19A0A0B4J1H4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv19A0A0B4J1H4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv19A0A0B4J1H4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv19A0A0B4J1H4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv19A0A0B4J1H4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
Trbv19A0A0B4J1H4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv19A0A0B4J1H4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Trbv19A0A0B4J1H4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv19A0A0B4J1H4 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv19A0A0B4J1H4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm10052-201ENSMUST00000168019 960 ntBASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm7729-201ENSMUST00000050143 801 ntBASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trbv19A0A0B4J1H4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms