Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Gm7638-201ENSMUST00000121348 967 ntBASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trbv3A0A0A6YYE2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Gm10849-201ENSMUST00000100397 618 ntBASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv3A0A0A6YYE2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Gm12896-201ENSMUST00000118430 226 ntBASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv3A0A0A6YYE2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trbv3A0A0A6YYE2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trbv3A0A0A6YYE2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trbv3A0A0A6YYE2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trbv3A0A0A6YYE2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms