Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ighv1-47A0A0A6YY41 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ighv1-47A0A0A6YY41 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ighv1-47A0A0A6YY41 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ighv1-47A0A0A6YY41 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ighv1-47A0A0A6YY41 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ighv1-47A0A0A6YY41 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ighv1-47A0A0A6YY41 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ighv1-47A0A0A6YY41 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ighv1-47A0A0A6YY41 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-47A0A0A6YY41 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-47A0A0A6YY41 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ighv1-47A0A0A6YY41 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ighv1-47A0A0A6YY41 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ighv1-47A0A0A6YY41 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.21□□□□□ -0.3
Ighv1-47A0A0A6YY41 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Gm37722-201ENSMUST00000193757 208 ntBASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-47A0A0A6YY41 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Gm10231-201ENSMUST00000181584 441 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms