Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-4A0A075B654 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Gm43697-201ENSMUST00000199637 2581 ntBASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Gm43399-201ENSMUST00000202546 2374 ntBASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav3-4A0A075B654 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Gm45102-201ENSMUST00000207427 857 ntBASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-4A0A075B654 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Gm10655-201ENSMUST00000098658 1397 ntBASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Gm21451-201ENSMUST00000111062 2775 ntBASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Gm13401-201ENSMUST00000117074 291 ntBASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Gm45779-201ENSMUST00000212189 4064 ntBASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-4A0A075B654 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms