Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav10nA0A075B622 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav10nA0A075B622 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav10nA0A075B622 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav10nA0A075B622 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav10nA0A075B622 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav10nA0A075B622 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav10nA0A075B622 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trav10nA0A075B622 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav10nA0A075B622 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav10nA0A075B622 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.21□□□□□ -0.14
Trav10nA0A075B622 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.21□□□□□ -0.14
Trav10nA0A075B622 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.2□□□□□ -0.14
Trav10nA0A075B622 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav10nA0A075B622 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav10nA0A075B622 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav10nA0A075B622 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav10nA0A075B622 Dancr-204ENSMUST00000132389 2347 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms