Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Gm45102-201ENSMUST00000207427 857 ntBASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav4n-4A0A075B615 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Gm12134-201ENSMUST00000122109 520 ntBASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Gm45417-201ENSMUST00000209533 758 ntBASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav4n-4A0A075B615 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Gm5408-201ENSMUST00000197998 747 ntBASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 AC093043.1-201ENSMUST00000226700 898 ntBASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav4n-4A0A075B615 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Gm14117-201ENSMUST00000122417 843 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms