Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Gm16061-201ENSMUST00000122167 857 ntBASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-1A0A075B5Z8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-1A0A075B5Z8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6-1A0A075B5Z8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6-1A0A075B5Z8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6-1A0A075B5Z8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-1A0A075B5Z8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms