Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 SNORA40.17-201ENST00000517256 115 ntBASIC0.73□□□□□ -2.29
SIT1Q9Y3P8 RNA5SP257-201ENST00000363023 116 ntBASIC0.72□□□□□ -2.29
SIT1Q9Y3P8 RNU6-590P-201ENST00000365039 107 ntBASIC0.72□□□□□ -2.29
SIT1Q9Y3P8 AC098934.3-201ENST00000430450 190 ntBASIC0.72□□□□□ -2.29
SIT1Q9Y3P8 RNU6-863P-201ENST00000515989 104 ntBASIC0.72□□□□□ -2.29
SIT1Q9Y3P8 SCARNA17.3-201ENST00000516381 125 ntBASIC0.72□□□□□ -2.29
SIT1Q9Y3P8 RNA5SP121-201ENST00000516537 101 ntBASIC0.72□□□□□ -2.29
SIT1Q9Y3P8 MIR4752-201ENST00000579672 72 ntBASIC0.72□□□□□ -2.29
SIT1Q9Y3P8 U7.6-201ENST00000610841 64 ntBASIC0.72□□□□□ -2.29
SIT1Q9Y3P8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.72□□□□□ -2.29
SIT1Q9Y3P8 MIR330-201ENST00000362196 94 ntBASIC0.71□□□□□ -2.3
SIT1Q9Y3P8 SNORD113.1-201ENST00000363280 73 ntBASIC0.71□□□□□ -2.3
SIT1Q9Y3P8 SNORD45A-201ENST00000384512 84 ntBASIC0.71□□□□□ -2.3
SIT1Q9Y3P8 RNU6-881P-201ENST00000516813 102 ntBASIC0.71□□□□□ -2.3
SIT1Q9Y3P8 Y_RNA.125-201ENST00000363371 111 ntBASIC0.7□□□□□ -2.3
SIT1Q9Y3P8 RNU6-649P-201ENST00000384463 107 ntBASIC0.7□□□□□ -2.3
SIT1Q9Y3P8 MIR203A-201ENST00000384836 110 ntBASIC0.7□□□□□ -2.3
SIT1Q9Y3P8 MIR652-201ENST00000385278 98 ntBASIC0.7□□□□□ -2.3
SIT1Q9Y3P8 HMGN2P22-201ENST00000427588 175 ntBASIC0.7□□□□□ -2.3
SIT1Q9Y3P8 MIR548AE1-201ENST00000583292 70 ntBASIC0.7□□□□□ -2.3
SIT1Q9Y3P8 MIR6739-201ENST00000622461 75 ntBASIC0.7□□□□□ -2.3
SIT1Q9Y3P8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
SIT1Q9Y3P8 RNU6-990P-201ENST00000364385 104 ntBASIC0.69□□□□□ -2.3
SIT1Q9Y3P8 SNORA2A-201ENST00000383885 135 ntBASIC0.69□□□□□ -2.3
SIT1Q9Y3P8 RNU6-895P-201ENST00000384125 103 ntBASIC0.69□□□□□ -2.3
SIT1Q9Y3P8 RNU6-663P-201ENST00000391105 106 ntBASIC0.69□□□□□ -2.3
SIT1Q9Y3P8 uc_338.10-201ENST00000621872 182 ntBASIC0.69□□□□□ -2.3
SIT1Q9Y3P8 AC243829.3-201ENST00000622177 108 ntBASIC0.69□□□□□ -2.3
SIT1Q9Y3P8 MIR4473-201ENST00000583731 91 ntBASIC0.68□□□□□ -2.3
SIT1Q9Y3P8 RNU6-1216P-201ENST00000362590 107 ntBASIC0.67□□□□□ -2.3
SIT1Q9Y3P8 RNU6-788P-201ENST00000390967 104 ntBASIC0.67□□□□□ -2.3
SIT1Q9Y3P8 SNORD30.1-201ENST00000391309 70 ntBASIC0.67□□□□□ -2.3
SIT1Q9Y3P8 MIR1197-201ENST00000408818 88 ntBASIC0.67□□□□□ -2.3
SIT1Q9Y3P8 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.66□□□□□ -2.3
SIT1Q9Y3P8 RNU4-54P-201ENST00000516428 129 ntBASIC0.66□□□□□ -2.3
SIT1Q9Y3P8 MIR6755-201ENST00000619993 66 ntBASIC0.66□□□□□ -2.3
SIT1Q9Y3P8 U6.111-201ENST00000636093 83 ntBASIC0.66□□□□□ -2.3
SIT1Q9Y3P8 SNORD116-24-201ENST00000384549 92 ntBASIC0.65□□□□□ -2.31
SIT1Q9Y3P8 Y_RNA.633-201ENST00000459107 95 ntBASIC0.65□□□□□ -2.31
SIT1Q9Y3P8 RNU6-229P-201ENST00000516614 102 ntBASIC0.65□□□□□ -2.31
SIT1Q9Y3P8 MIR5087-201ENST00000635826 76 ntBASIC0.65□□□□□ -2.31
SIT1Q9Y3P8 MIR146A-201ENST00000385201 99 ntBASIC0.64□□□□□ -2.31
SIT1Q9Y3P8 RNU6-945P-201ENST00000383947 107 ntBASIC0.63□□□□□ -2.31
SIT1Q9Y3P8 Y_RNA.423-201ENST00000384057 113 ntBASIC0.63□□□□□ -2.31
SIT1Q9Y3P8 MIR548E-201ENST00000408287 88 ntBASIC0.63□□□□□ -2.31
SIT1Q9Y3P8 AC244090.1-201ENST00000441884 93 ntBASIC0.63□□□□□ -2.31
SIT1Q9Y3P8 MTND4LP1-201ENST00000446263 157 ntBASIC0.63□□□□□ -2.31
SIT1Q9Y3P8 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.63□□□□□ -2.31
SIT1Q9Y3P8 SNORD44.1-201ENST00000363202 61 ntBASIC0.62□□□□□ -2.31
SIT1Q9Y3P8 RNA5SP62-201ENST00000363457 110 ntBASIC0.62□□□□□ -2.31
SIT1Q9Y3P8 RNU6-645P-201ENST00000364649 106 ntBASIC0.62□□□□□ -2.31
SIT1Q9Y3P8 SNORA63.6-201ENST00000364921 119 ntBASIC0.62□□□□□ -2.31
SIT1Q9Y3P8 Y_RNA.386-201ENST00000383913 105 ntBASIC0.62□□□□□ -2.31
SIT1Q9Y3P8 SNORA15B-2-201ENST00000384058 135 ntBASIC0.62□□□□□ -2.31
SIT1Q9Y3P8 SNORA15B-1-201ENST00000384334 135 ntBASIC0.62□□□□□ -2.31
SIT1Q9Y3P8 MIR521-2-201ENST00000384818 87 ntBASIC0.62□□□□□ -2.31
SIT1Q9Y3P8 RNU6-982P-201ENST00000516216 102 ntBASIC0.62□□□□□ -2.31
SIT1Q9Y3P8 MIR548AD-201ENST00000584780 82 ntBASIC0.62□□□□□ -2.31
SIT1Q9Y3P8 MIR20A-201ENST00000362279 71 ntBASIC0.61□□□□□ -2.31
SIT1Q9Y3P8 RNU6-1162P-201ENST00000384443 104 ntBASIC0.61□□□□□ -2.31
SIT1Q9Y3P8 RNU6-800P-201ENST00000384473 103 ntBASIC0.61□□□□□ -2.31
SIT1Q9Y3P8 RNU6-656P-201ENST00000516785 107 ntBASIC0.61□□□□□ -2.31
SIT1Q9Y3P8 SNORA25.4-201ENST00000363666 124 ntBASIC0.6□□□□□ -2.31
SIT1Q9Y3P8 MIR582-201ENST00000365731 98 ntBASIC0.6□□□□□ -2.31
SIT1Q9Y3P8 Y_RNA.443-201ENST00000384135 111 ntBASIC0.6□□□□□ -2.31
SIT1Q9Y3P8 MIR501-201ENST00000390204 84 ntBASIC0.6□□□□□ -2.31
SIT1Q9Y3P8 AC021146.9-201ENST00000512503 156 ntBASIC0.6□□□□□ -2.31
SIT1Q9Y3P8 RNA5SP147-201ENST00000516493 109 ntBASIC0.6□□□□□ -2.31
SIT1Q9Y3P8 MIR4677-201ENST00000584153 80 ntBASIC0.6□□□□□ -2.31
SIT1Q9Y3P8 RNA5SP499-201ENST00000363982 119 ntBASIC0.59□□□□□ -2.31
SIT1Q9Y3P8 SNORD114-29-201ENST00000364819 70 ntBASIC0.59□□□□□ -2.31
SIT1Q9Y3P8 RNA5SP128-201ENST00000365305 116 ntBASIC0.59□□□□□ -2.31
SIT1Q9Y3P8 RNU6-630P-201ENST00000391258 106 ntBASIC0.59□□□□□ -2.31
SIT1Q9Y3P8 SNORD2-201ENST00000459163 69 ntBASIC0.59□□□□□ -2.31
SIT1Q9Y3P8 RNU6-1232P-201ENST00000516299 86 ntBASIC0.59□□□□□ -2.31
SIT1Q9Y3P8 AC005520.4-201ENST00000604337 90 ntBASIC0.59□□□□□ -2.31
SIT1Q9Y3P8 MIR760-201ENST00000390220 80 ntBASIC0.58□□□□□ -2.32
SIT1Q9Y3P8 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.58□□□□□ -2.32
SIT1Q9Y3P8 RNU6-668P-201ENST00000364180 107 ntBASIC0.57□□□□□ -2.32
SIT1Q9Y3P8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.57□□□□□ -2.32
SIT1Q9Y3P8 AC243829.6-201ENST00000612652 106 ntBASIC0.57□□□□□ -2.32
SIT1Q9Y3P8 RNU6-471P-201ENST00000383944 106 ntBASIC0.56□□□□□ -2.32
SIT1Q9Y3P8 MIR516B1-201ENST00000385211 90 ntBASIC0.56□□□□□ -2.32
SIT1Q9Y3P8 SNORA68.3-201ENST00000515906 83 ntBASIC0.55□□□□□ -2.32
SIT1Q9Y3P8 MIRLET7D-201ENST00000362263 87 ntBASIC0.54□□□□□ -2.32
SIT1Q9Y3P8 RNA5SP215-201ENST00000363440 122 ntBASIC0.54□□□□□ -2.32
SIT1Q9Y3P8 Y_RNA.375-201ENST00000365625 101 ntBASIC0.54□□□□□ -2.32
SIT1Q9Y3P8 MIR876-201ENST00000401147 81 ntBASIC0.54□□□□□ -2.32
SIT1Q9Y3P8 snoU13.13-201ENST00000458842 104 ntBASIC0.54□□□□□ -2.32
SIT1Q9Y3P8 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
SIT1Q9Y3P8 VTRNA1-3-201ENST00000365645 89 ntBASIC0.53□□□□□ -2.32
SIT1Q9Y3P8 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
SIT1Q9Y3P8 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.53□□□□□ -2.32
SIT1Q9Y3P8 AC114737.2-201ENST00000421583 173 ntBASIC0.53□□□□□ -2.32
SIT1Q9Y3P8 RNU7-188P-201ENST00000517063 64 ntBASIC0.53□□□□□ -2.32
SIT1Q9Y3P8 MIR2909-201ENST00000617113 69 ntBASIC0.53□□□□□ -2.32
SIT1Q9Y3P8 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.53□□□□□ -2.32
SIT1Q9Y3P8 MIR1265-201ENST00000408444 86 ntBASIC0.52□□□□□ -2.33
SIT1Q9Y3P8 SNORA62.5-201ENST00000516634 120 ntBASIC0.52□□□□□ -2.33
SIT1Q9Y3P8 RNU6-175P-201ENST00000516896 107 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 180.5 ms