Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SNORD71-201ENST00000411292 86 ntBASIC0.93□□□□□ -2.26
FNDC3AQ9Y2H6 SNORA25.4-201ENST00000363666 124 ntBASIC0.92□□□□□ -2.26
FNDC3AQ9Y2H6 MIR518A1-201ENST00000385068 85 ntBASIC0.92□□□□□ -2.26
FNDC3AQ9Y2H6 AC021146.9-201ENST00000512503 156 ntBASIC0.92□□□□□ -2.26
FNDC3AQ9Y2H6 RNU6-1232P-201ENST00000516299 86 ntBASIC0.92□□□□□ -2.26
FNDC3AQ9Y2H6 RNU6-229P-201ENST00000516614 102 ntBASIC0.92□□□□□ -2.26
FNDC3AQ9Y2H6 RNU6-656P-201ENST00000516785 107 ntBASIC0.92□□□□□ -2.26
FNDC3AQ9Y2H6 AL590095.2-201ENST00000604136 117 ntBASIC0.92□□□□□ -2.26
FNDC3AQ9Y2H6 MIR6739-201ENST00000622461 75 ntBASIC0.92□□□□□ -2.26
FNDC3AQ9Y2H6 MIR5706-201ENST00000579841 80 ntBASIC0.91□□□□□ -2.26
FNDC3AQ9Y2H6 SNORA2A-201ENST00000383885 135 ntBASIC0.9□□□□□ -2.27
FNDC3AQ9Y2H6 RN7SL793P-201ENST00000583259 296 ntBASIC0.9□□□□□ -2.27
FNDC3AQ9Y2H6 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
FNDC3AQ9Y2H6 MIR216A-201ENST00000385063 110 ntBASIC0.89□□□□□ -2.27
FNDC3AQ9Y2H6 MIR548E-201ENST00000408287 88 ntBASIC0.89□□□□□ -2.27
FNDC3AQ9Y2H6 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.89□□□□□ -2.27
FNDC3AQ9Y2H6 Y_RNA.125-201ENST00000363371 111 ntBASIC0.88□□□□□ -2.27
FNDC3AQ9Y2H6 RNU6-471P-201ENST00000383944 106 ntBASIC0.88□□□□□ -2.27
FNDC3AQ9Y2H6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
FNDC3AQ9Y2H6 Y_RNA.250-201ENST00000364542 110 ntBASIC0.87□□□□□ -2.27
FNDC3AQ9Y2H6 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
FNDC3AQ9Y2H6 RNU6-1162P-201ENST00000384443 104 ntBASIC0.87□□□□□ -2.27
FNDC3AQ9Y2H6 MIR4714-201ENST00000580728 77 ntBASIC0.87□□□□□ -2.27
FNDC3AQ9Y2H6 MIR6755-201ENST00000619993 66 ntBASIC0.87□□□□□ -2.27
FNDC3AQ9Y2H6 SNORA63.6-201ENST00000364921 119 ntBASIC0.86□□□□□ -2.27
FNDC3AQ9Y2H6 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.86□□□□□ -2.27
FNDC3AQ9Y2H6 MIR521-2-201ENST00000384818 87 ntBASIC0.85□□□□□ -2.27
FNDC3AQ9Y2H6 AC098934.3-201ENST00000430450 190 ntBASIC0.85□□□□□ -2.27
FNDC3AQ9Y2H6 MIR516B1-201ENST00000385211 90 ntBASIC0.84□□□□□ -2.27
FNDC3AQ9Y2H6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.84□□□□□ -2.27
FNDC3AQ9Y2H6 AL157398.1-201ENST00000452981 186 ntBASIC0.84□□□□□ -2.27
FNDC3AQ9Y2H6 Y_RNA.633-201ENST00000459107 95 ntBASIC0.84□□□□□ -2.27
FNDC3AQ9Y2H6 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
FNDC3AQ9Y2H6 SNORA33.1-201ENST00000364957 130 ntBASIC0.83□□□□□ -2.28
FNDC3AQ9Y2H6 MIR548C-201ENST00000384815 97 ntBASIC0.83□□□□□ -2.28
FNDC3AQ9Y2H6 RNU6-945P-201ENST00000383947 107 ntBASIC0.82□□□□□ -2.28
FNDC3AQ9Y2H6 MIR9-2-201ENST00000384838 87 ntBASIC0.82□□□□□ -2.28
FNDC3AQ9Y2H6 MIR760-201ENST00000390220 80 ntBASIC0.82□□□□□ -2.28
FNDC3AQ9Y2H6 RNU6-1089P-201ENST00000516473 104 ntBASIC0.82□□□□□ -2.28
FNDC3AQ9Y2H6 MIR4511-201ENST00000582784 87 ntBASIC0.82□□□□□ -2.28
FNDC3AQ9Y2H6 U7.6-201ENST00000610841 64 ntBASIC0.81□□□□□ -2.28
FNDC3AQ9Y2H6 MIR20A-201ENST00000362279 71 ntBASIC0.8□□□□□ -2.28
FNDC3AQ9Y2H6 SNORA15B-2-201ENST00000384058 135 ntBASIC0.8□□□□□ -2.28
FNDC3AQ9Y2H6 SNORA15B-1-201ENST00000384334 135 ntBASIC0.8□□□□□ -2.28
FNDC3AQ9Y2H6 MIR501-201ENST00000390204 84 ntBASIC0.8□□□□□ -2.28
FNDC3AQ9Y2H6 AC103706.3-201ENST00000636297 85 ntBASIC0.8□□□□□ -2.28
FNDC3AQ9Y2H6 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
FNDC3AQ9Y2H6 Y_RNA.375-201ENST00000365625 101 ntBASIC0.79□□□□□ -2.28
FNDC3AQ9Y2H6 RNU7-188P-201ENST00000517063 64 ntBASIC0.79□□□□□ -2.28
FNDC3AQ9Y2H6 MIR4677-201ENST00000584153 80 ntBASIC0.79□□□□□ -2.28
FNDC3AQ9Y2H6 AC244090.1-201ENST00000441884 93 ntBASIC0.78□□□□□ -2.28
FNDC3AQ9Y2H6 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
FNDC3AQ9Y2H6 MIR548V-201ENST00000584165 80 ntBASIC0.78□□□□□ -2.28
FNDC3AQ9Y2H6 MIR6513-201ENST00000621188 64 ntBASIC0.78□□□□□ -2.28
FNDC3AQ9Y2H6 MIR499B-201ENST00000636498 73 ntBASIC0.78□□□□□ -2.28
FNDC3AQ9Y2H6 SNORD44.1-201ENST00000363202 61 ntBASIC0.77□□□□□ -2.29
FNDC3AQ9Y2H6 MIR508-201ENST00000384857 115 ntBASIC0.77□□□□□ -2.29
FNDC3AQ9Y2H6 RNA5SP299-201ENST00000391203 116 ntBASIC0.77□□□□□ -2.29
FNDC3AQ9Y2H6 RNU7-129P-201ENST00000516128 62 ntBASIC0.77□□□□□ -2.29
FNDC3AQ9Y2H6 RNU6-542P-201ENST00000516405 103 ntBASIC0.77□□□□□ -2.29
FNDC3AQ9Y2H6 MIR6835-201ENST00000621552 64 ntBASIC0.77□□□□□ -2.29
FNDC3AQ9Y2H6 SNORD114-29-201ENST00000364819 70 ntBASIC0.76□□□□□ -2.29
FNDC3AQ9Y2H6 MIR193B-201ENST00000384907 83 ntBASIC0.76□□□□□ -2.29
FNDC3AQ9Y2H6 RPL39P28-201ENST00000465655 155 ntBASIC0.76□□□□□ -2.29
FNDC3AQ9Y2H6 U6.96-201ENST00000636425 70 ntBASIC0.76□□□□□ -2.29
FNDC3AQ9Y2H6 Y_RNA.374-201ENST00000365606 101 ntBASIC0.75□□□□□ -2.29
FNDC3AQ9Y2H6 MIR4653-201ENST00000585107 83 ntBASIC0.75□□□□□ -2.29
FNDC3AQ9Y2H6 AC084368.1-201ENST00000620935 65 ntBASIC0.75□□□□□ -2.29
FNDC3AQ9Y2H6 RNA5SP215-201ENST00000363440 122 ntBASIC0.74□□□□□ -2.29
FNDC3AQ9Y2H6 RNA5SP128-201ENST00000365305 116 ntBASIC0.74□□□□□ -2.29
FNDC3AQ9Y2H6 SNORA68.3-201ENST00000515906 83 ntBASIC0.74□□□□□ -2.29
FNDC3AQ9Y2H6 RNU6-848P-201ENST00000515948 107 ntBASIC0.74□□□□□ -2.29
FNDC3AQ9Y2H6 RNU6-617P-201ENST00000516147 107 ntBASIC0.74□□□□□ -2.29
FNDC3AQ9Y2H6 RNU6-473P-201ENST00000516164 107 ntBASIC0.74□□□□□ -2.29
FNDC3AQ9Y2H6 RNU6-1049P-201ENST00000516414 107 ntBASIC0.74□□□□□ -2.29
FNDC3AQ9Y2H6 MIR103A1-201ENST00000362165 78 ntBASIC0.73□□□□□ -2.29
FNDC3AQ9Y2H6 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
FNDC3AQ9Y2H6 MIR936-201ENST00000401264 98 ntBASIC0.73□□□□□ -2.29
FNDC3AQ9Y2H6 MIR1273G-201ENST00000577677 100 ntBASIC0.73□□□□□ -2.29
FNDC3AQ9Y2H6 MIR548AD-201ENST00000584780 82 ntBASIC0.73□□□□□ -2.29
FNDC3AQ9Y2H6 AC243829.6-201ENST00000612652 106 ntBASIC0.73□□□□□ -2.29
FNDC3AQ9Y2H6 U2.7-201ENST00000619197 100 ntBASIC0.73□□□□□ -2.29
FNDC3AQ9Y2H6 Y_RNA.30-201ENST00000362572 97 ntBASIC0.72□□□□□ -2.29
FNDC3AQ9Y2H6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.72□□□□□ -2.29
FNDC3AQ9Y2H6 RNU6-175P-201ENST00000516896 107 ntBASIC0.72□□□□□ -2.29
FNDC3AQ9Y2H6 AC090617.8-201ENST00000623339 167 ntBASIC0.72□□□□□ -2.29
FNDC3AQ9Y2H6 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.72□□□□□ -2.29
FNDC3AQ9Y2H6 AC110620.1-201ENST00000416042 228 ntBASIC0.71□□□□□ -2.3
FNDC3AQ9Y2H6 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.71□□□□□ -2.3
FNDC3AQ9Y2H6 CYP3A54P-201ENST00000566950 75 ntBASIC0.71□□□□□ -2.3
FNDC3AQ9Y2H6 MIR3925-201ENST00000584674 77 ntBASIC0.71□□□□□ -2.3
FNDC3AQ9Y2H6 MIR630-201ENST00000384957 97 ntBASIC0.7□□□□□ -2.3
FNDC3AQ9Y2H6 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
FNDC3AQ9Y2H6 SNORD114-23-201ENST00000363536 72 ntBASIC0.69□□□□□ -2.3
FNDC3AQ9Y2H6 RNU6-669P-201ENST00000365575 107 ntBASIC0.69□□□□□ -2.3
FNDC3AQ9Y2H6 RN7SL660P-201ENST00000614852 299 ntBASIC0.69□□□□□ -2.3
FNDC3AQ9Y2H6 RNU6-1036P-201ENST00000383959 104 ntBASIC0.68□□□□□ -2.3
FNDC3AQ9Y2H6 SNORA49-201ENST00000386157 136 ntBASIC0.68□□□□□ -2.3
FNDC3AQ9Y2H6 RNA5SP193-201ENST00000410353 107 ntBASIC0.68□□□□□ -2.3
FNDC3AQ9Y2H6 RNU6-863P-201ENST00000515989 104 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 248 ms