Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 MIR4773-1-201ENST00000637203 78 ntBASIC-0.07□□□□□ -2.42
CDK11AQ9UQ88 RNA5SP98-201ENST00000363158 137 ntBASIC-0.08□□□□□ -2.42
CDK11AQ9UQ88 RNU6-681P-201ENST00000364012 104 ntBASIC-0.08□□□□□ -2.42
CDK11AQ9UQ88 RNU6-382P-201ENST00000365181 106 ntBASIC-0.08□□□□□ -2.42
CDK11AQ9UQ88 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.08□□□□□ -2.42
CDK11AQ9UQ88 RNU6-175P-201ENST00000516896 107 ntBASIC-0.08□□□□□ -2.42
CDK11AQ9UQ88 AC140658.3-201ENST00000567603 271 ntBASIC-0.08□□□□□ -2.42
CDK11AQ9UQ88 RNU6-824P-201ENST00000363724 104 ntBASIC-0.09□□□□□ -2.42
CDK11AQ9UQ88 RNA5SP476-201ENST00000516613 103 ntBASIC-0.09□□□□□ -2.42
CDK11AQ9UQ88 U6.81-201ENST00000612550 106 ntBASIC-0.09□□□□□ -2.42
CDK11AQ9UQ88 AC006160.2-201ENST00000637708 154 ntBASIC-0.09□□□□□ -2.42
CDK11AQ9UQ88 RNU6-624P-201ENST00000363411 107 ntBASIC-0.1□□□□□ -2.43
CDK11AQ9UQ88 RNA5SP170-201ENST00000517150 101 ntBASIC-0.1□□□□□ -2.43
CDK11AQ9UQ88 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.1□□□□□ -2.43
CDK11AQ9UQ88 RNU6-46P-201ENST00000383860 107 ntBASIC-0.11□□□□□ -2.43
CDK11AQ9UQ88 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.11□□□□□ -2.43
CDK11AQ9UQ88 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.11□□□□□ -2.43
CDK11AQ9UQ88 MIR655-201ENST00000362159 97 ntBASIC-0.12□□□□□ -2.43
CDK11AQ9UQ88 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.12□□□□□ -2.43
CDK11AQ9UQ88 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.12□□□□□ -2.43
CDK11AQ9UQ88 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.13□□□□□ -2.43
CDK11AQ9UQ88 MIR450A2-201ENST00000385022 100 ntBASIC-0.13□□□□□ -2.43
CDK11AQ9UQ88 AL691482.2-201ENST00000457453 84 ntBASIC-0.13□□□□□ -2.43
CDK11AQ9UQ88 MIR6507-201ENST00000613630 70 ntBASIC-0.13□□□□□ -2.43
CDK11AQ9UQ88 MIR548E-201ENST00000408287 88 ntBASIC-0.14□□□□□ -2.43
CDK11AQ9UQ88 AC244250.2-201ENST00000418731 148 ntBASIC-0.14□□□□□ -2.43
CDK11AQ9UQ88 RNU6-557P-201ENST00000516842 110 ntBASIC-0.14□□□□□ -2.43
CDK11AQ9UQ88 YWHAEP3-201ENST00000582767 121 ntBASIC-0.14□□□□□ -2.43
CDK11AQ9UQ88 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.15□□□□□ -2.43
CDK11AQ9UQ88 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.15□□□□□ -2.43
CDK11AQ9UQ88 RNU6-752P-201ENST00000516376 102 ntBASIC-0.15□□□□□ -2.43
CDK11AQ9UQ88 SNORA32.1-201ENST00000364514 115 ntBASIC-0.16□□□□□ -2.44
CDK11AQ9UQ88 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.16□□□□□ -2.44
CDK11AQ9UQ88 SNORA49-201ENST00000386157 136 ntBASIC-0.16□□□□□ -2.44
CDK11AQ9UQ88 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.16□□□□□ -2.44
CDK11AQ9UQ88 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.17□□□□□ -2.44
CDK11AQ9UQ88 RNU6-340P-201ENST00000364005 107 ntBASIC-0.17□□□□□ -2.44
CDK11AQ9UQ88 SNORA63.6-201ENST00000364921 119 ntBASIC-0.17□□□□□ -2.44
CDK11AQ9UQ88 MIR582-201ENST00000365731 98 ntBASIC-0.17□□□□□ -2.44
CDK11AQ9UQ88 AC145423.2-201ENST00000610631 239 ntBASIC-0.17□□□□□ -2.44
CDK11AQ9UQ88 MIR6509-201ENST00000614603 85 ntBASIC-0.17□□□□□ -2.44
CDK11AQ9UQ88 SNORD114-12-201ENST00000365400 75 ntBASIC-0.18□□□□□ -2.44
CDK11AQ9UQ88 RNU6-260P-201ENST00000384092 107 ntBASIC-0.18□□□□□ -2.44
CDK11AQ9UQ88 MIR5588-201ENST00000581890 63 ntBASIC-0.18□□□□□ -2.44
CDK11AQ9UQ88 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.18□□□□□ -2.44
CDK11AQ9UQ88 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.19□□□□□ -2.44
CDK11AQ9UQ88 RNU6-129P-201ENST00000391022 107 ntBASIC-0.19□□□□□ -2.44
CDK11AQ9UQ88 RNU6-380P-201ENST00000410207 107 ntBASIC-0.19□□□□□ -2.44
CDK11AQ9UQ88 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.21□□□□□ -2.44
CDK11AQ9UQ88 SNORA18.1-201ENST00000363418 128 ntBASIC-0.21□□□□□ -2.44
CDK11AQ9UQ88 RNU6-686P-201ENST00000364839 107 ntBASIC-0.21□□□□□ -2.44
CDK11AQ9UQ88 RNU6-242P-201ENST00000384359 107 ntBASIC-0.21□□□□□ -2.44
CDK11AQ9UQ88 SNORD114-11-201ENST00000363738 75 ntBASIC-0.22□□□□□ -2.44
CDK11AQ9UQ88 SNORD49B-201ENST00000365172 72 ntBASIC-0.22□□□□□ -2.44
CDK11AQ9UQ88 SNORD4A-201ENST00000459174 72 ntBASIC-0.22□□□□□ -2.44
CDK11AQ9UQ88 AL590491.3-201ENST00000610731 82 ntBASIC-0.22□□□□□ -2.44
CDK11AQ9UQ88 MIR494-201ENST00000349529 81 ntBASIC-0.23□□□□□ -2.45
CDK11AQ9UQ88 SNORD115-25-201ENST00000362619 82 ntBASIC-0.23□□□□□ -2.45
CDK11AQ9UQ88 RNU6-990P-201ENST00000364385 104 ntBASIC-0.23□□□□□ -2.45
CDK11AQ9UQ88 RNU6-302P-201ENST00000365249 107 ntBASIC-0.23□□□□□ -2.45
CDK11AQ9UQ88 RNU6-979P-201ENST00000383896 107 ntBASIC-0.23□□□□□ -2.45
CDK11AQ9UQ88 RNU6-820P-201ENST00000384273 107 ntBASIC-0.23□□□□□ -2.45
CDK11AQ9UQ88 AC021146.9-201ENST00000512503 156 ntBASIC-0.23□□□□□ -2.45
CDK11AQ9UQ88 MIR5589-201ENST00000579442 60 ntBASIC-0.23□□□□□ -2.45
CDK11AQ9UQ88 MIR4636-201ENST00000582271 80 ntBASIC-0.23□□□□□ -2.45
CDK11AQ9UQ88 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.24□□□□□ -2.45
CDK11AQ9UQ88 MIR9-2-201ENST00000384838 87 ntBASIC-0.24□□□□□ -2.45
CDK11AQ9UQ88 SNORA40.17-201ENST00000517256 115 ntBASIC-0.24□□□□□ -2.45
CDK11AQ9UQ88 AP000676.1-201ENST00000533307 52 ntBASIC-0.24□□□□□ -2.45
CDK11AQ9UQ88 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
CDK11AQ9UQ88 SNORA2.1-201ENST00000363089 137 ntBASIC-0.25□□□□□ -2.45
CDK11AQ9UQ88 AC022137.1-201ENST00000483735 151 ntBASIC-0.25□□□□□ -2.45
CDK11AQ9UQ88 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.25□□□□□ -2.45
CDK11AQ9UQ88 MIR6086-201ENST00000638065 55 ntBASIC-0.25□□□□□ -2.45
CDK11AQ9UQ88 RNU6-455P-201ENST00000384681 107 ntBASIC-0.26□□□□□ -2.45
CDK11AQ9UQ88 SNORD56B-201ENST00000384713 71 ntBASIC-0.26□□□□□ -2.45
CDK11AQ9UQ88 RNA5SP300-201ENST00000391197 107 ntBASIC-0.26□□□□□ -2.45
CDK11AQ9UQ88 MIR203A-201ENST00000384836 110 ntBASIC-0.27□□□□□ -2.45
CDK11AQ9UQ88 RNU7-171P-201ENST00000459581 62 ntBASIC-0.27□□□□□ -2.45
CDK11AQ9UQ88 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.27□□□□□ -2.45
CDK11AQ9UQ88 RNU6-303P-201ENST00000517091 106 ntBASIC-0.27□□□□□ -2.45
CDK11AQ9UQ88 RNA5SP169-201ENST00000517268 117 ntBASIC-0.27□□□□□ -2.45
CDK11AQ9UQ88 IGLVI-20-201ENST00000519296 130 ntBASIC-0.27□□□□□ -2.45
CDK11AQ9UQ88 MIR3657-201ENST00000584818 117 ntBASIC-0.27□□□□□ -2.45
CDK11AQ9UQ88 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.28□□□□□ -2.45
CDK11AQ9UQ88 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
CDK11AQ9UQ88 HAR1A.1-201ENST00000459583 118 ntBASIC-0.28□□□□□ -2.45
CDK11AQ9UQ88 MIR4263-201ENST00000584745 83 ntBASIC-0.28□□□□□ -2.45
CDK11AQ9UQ88 MIR3666-201ENST00000607845 111 ntBASIC-0.28□□□□□ -2.45
CDK11AQ9UQ88 MIR4788-201ENST00000639104 80 ntBASIC-0.28□□□□□ -2.45
CDK11AQ9UQ88 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.29□□□□□ -2.46
CDK11AQ9UQ88 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.29□□□□□ -2.46
CDK11AQ9UQ88 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.29□□□□□ -2.46
CDK11AQ9UQ88 snoU13.13-201ENST00000458842 104 ntBASIC-0.29□□□□□ -2.46
CDK11AQ9UQ88 MIR4802-201ENST00000581881 80 ntBASIC-0.29□□□□□ -2.46
CDK11AQ9UQ88 uc_338.36-201ENST00000622331 158 ntBASIC-0.29□□□□□ -2.46
CDK11AQ9UQ88 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.29□□□□□ -2.46
CDK11AQ9UQ88 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.3□□□□□ -2.46
CDK11AQ9UQ88 MIR4280-201ENST00000582178 76 ntBASIC-0.3□□□□□ -2.46
CDK11AQ9UQ88 RNU6-502P-201ENST00000362419 108 ntBASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms