Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RNU6-1241P-201ENST00000384536 107 ntBASIC0.59□□□□□ -2.31
CDC42EP3Q9UKI2 MIR652-201ENST00000385278 98 ntBASIC0.59□□□□□ -2.31
CDC42EP3Q9UKI2 SCARNA17.3-201ENST00000516381 125 ntBASIC0.59□□□□□ -2.31
CDC42EP3Q9UKI2 MIR4711-201ENST00000578274 70 ntBASIC0.59□□□□□ -2.31
CDC42EP3Q9UKI2 MIR3657-201ENST00000584818 117 ntBASIC0.59□□□□□ -2.31
CDC42EP3Q9UKI2 U7.6-201ENST00000610841 64 ntBASIC0.59□□□□□ -2.31
CDC42EP3Q9UKI2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.59□□□□□ -2.31
CDC42EP3Q9UKI2 Y_RNA.423-201ENST00000384057 113 ntBASIC0.58□□□□□ -2.32
CDC42EP3Q9UKI2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.58□□□□□ -2.32
CDC42EP3Q9UKI2 MIR1197-201ENST00000408818 88 ntBASIC0.58□□□□□ -2.32
CDC42EP3Q9UKI2 RNU6-229P-201ENST00000516614 102 ntBASIC0.58□□□□□ -2.32
CDC42EP3Q9UKI2 MIR4473-201ENST00000583731 91 ntBASIC0.58□□□□□ -2.32
CDC42EP3Q9UKI2 uc_338.10-201ENST00000621872 182 ntBASIC0.58□□□□□ -2.32
CDC42EP3Q9UKI2 SNORD45.1-201ENST00000363181 77 ntBASIC0.57□□□□□ -2.32
CDC42EP3Q9UKI2 RNU6-1232P-201ENST00000516299 86 ntBASIC0.57□□□□□ -2.32
CDC42EP3Q9UKI2 SNORA2.1-201ENST00000363089 137 ntBASIC0.56□□□□□ -2.32
CDC42EP3Q9UKI2 RNU6-990P-201ENST00000364385 104 ntBASIC0.56□□□□□ -2.32
CDC42EP3Q9UKI2 RNA5SP193-201ENST00000410353 107 ntBASIC0.56□□□□□ -2.32
CDC42EP3Q9UKI2 RNU6-634P-201ENST00000459134 106 ntBASIC0.56□□□□□ -2.32
CDC42EP3Q9UKI2 MIR8053-201ENST00000613344 75 ntBASIC0.56□□□□□ -2.32
CDC42EP3Q9UKI2 SNORD115-22-201ENST00000364456 82 ntBASIC0.55□□□□□ -2.32
CDC42EP3Q9UKI2 MIR203A-201ENST00000384836 110 ntBASIC0.55□□□□□ -2.32
CDC42EP3Q9UKI2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.55□□□□□ -2.32
CDC42EP3Q9UKI2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.55□□□□□ -2.32
CDC42EP3Q9UKI2 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.55□□□□□ -2.32
CDC42EP3Q9UKI2 Y_RNA.250-201ENST00000364542 110 ntBASIC0.54□□□□□ -2.32
CDC42EP3Q9UKI2 MIR501-201ENST00000390204 84 ntBASIC0.54□□□□□ -2.32
CDC42EP3Q9UKI2 SNORA68.3-201ENST00000515906 83 ntBASIC0.54□□□□□ -2.32
CDC42EP3Q9UKI2 MIR548AD-201ENST00000584780 82 ntBASIC0.54□□□□□ -2.32
CDC42EP3Q9UKI2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
CDC42EP3Q9UKI2 MIR154-201ENST00000385243 84 ntBASIC0.53□□□□□ -2.32
CDC42EP3Q9UKI2 RNU6-604P-201ENST00000390917 100 ntBASIC0.53□□□□□ -2.32
CDC42EP3Q9UKI2 RNU6-871P-201ENST00000516122 100 ntBASIC0.53□□□□□ -2.32
CDC42EP3Q9UKI2 MIR4677-201ENST00000584153 80 ntBASIC0.53□□□□□ -2.32
CDC42EP3Q9UKI2 MIRLET7D-201ENST00000362263 87 ntBASIC0.52□□□□□ -2.33
CDC42EP3Q9UKI2 RNA5SP128-201ENST00000365305 116 ntBASIC0.52□□□□□ -2.33
CDC42EP3Q9UKI2 SNORD115-31-201ENST00000365318 82 ntBASIC0.52□□□□□ -2.33
CDC42EP3Q9UKI2 MIR760-201ENST00000390220 80 ntBASIC0.52□□□□□ -2.33
CDC42EP3Q9UKI2 RNU6-35P-201ENST00000384530 107 ntBASIC0.51□□□□□ -2.33
CDC42EP3Q9UKI2 Y_RNA.633-201ENST00000459107 95 ntBASIC0.51□□□□□ -2.33
CDC42EP3Q9UKI2 SNORA62.5-201ENST00000516634 120 ntBASIC0.51□□□□□ -2.33
CDC42EP3Q9UKI2 MIR6739-201ENST00000622461 75 ntBASIC0.51□□□□□ -2.33
CDC42EP3Q9UKI2 MIR582-201ENST00000365731 98 ntBASIC0.5□□□□□ -2.33
CDC42EP3Q9UKI2 RNU6-540P-201ENST00000384622 101 ntBASIC0.5□□□□□ -2.33
CDC42EP3Q9UKI2 MIR548E-201ENST00000408287 88 ntBASIC0.5□□□□□ -2.33
CDC42EP3Q9UKI2 AC073261.1-201ENST00000429409 121 ntBASIC0.5□□□□□ -2.33
CDC42EP3Q9UKI2 AC244090.1-201ENST00000441884 93 ntBASIC0.5□□□□□ -2.33
CDC42EP3Q9UKI2 RNA5SP476-201ENST00000516613 103 ntBASIC0.5□□□□□ -2.33
CDC42EP3Q9UKI2 MIR103A1-201ENST00000362165 78 ntBASIC0.49□□□□□ -2.33
CDC42EP3Q9UKI2 MIR20A-201ENST00000362279 71 ntBASIC0.49□□□□□ -2.33
CDC42EP3Q9UKI2 SNORD45A-201ENST00000384512 84 ntBASIC0.49□□□□□ -2.33
CDC42EP3Q9UKI2 MIR92A1-201ENST00000385233 78 ntBASIC0.49□□□□□ -2.33
CDC42EP3Q9UKI2 HAR1A.1-201ENST00000459583 118 ntBASIC0.49□□□□□ -2.33
CDC42EP3Q9UKI2 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
CDC42EP3Q9UKI2 SNORD113.1-201ENST00000363280 73 ntBASIC0.48□□□□□ -2.33
CDC42EP3Q9UKI2 MIR516B1-201ENST00000385211 90 ntBASIC0.48□□□□□ -2.33
CDC42EP3Q9UKI2 AC243829.6-201ENST00000612652 106 ntBASIC0.48□□□□□ -2.33
CDC42EP3Q9UKI2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CDC42EP3Q9UKI2 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
CDC42EP3Q9UKI2 SNORA63.6-201ENST00000364921 119 ntBASIC0.47□□□□□ -2.33
CDC42EP3Q9UKI2 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.47□□□□□ -2.33
CDC42EP3Q9UKI2 SNORD114-29-201ENST00000364819 70 ntBASIC0.46□□□□□ -2.34
CDC42EP3Q9UKI2 AC114801.3-201ENST00000510231 177 ntBASIC0.46□□□□□ -2.34
CDC42EP3Q9UKI2 RNU6-881P-201ENST00000516813 102 ntBASIC0.46□□□□□ -2.34
CDC42EP3Q9UKI2 MIR3925-201ENST00000584674 77 ntBASIC0.46□□□□□ -2.34
CDC42EP3Q9UKI2 AC090625.1-201ENST00000357130 210 ntBASIC0.45□□□□□ -2.34
CDC42EP3Q9UKI2 MIR521-2-201ENST00000384818 87 ntBASIC0.45□□□□□ -2.34
CDC42EP3Q9UKI2 MIR876-201ENST00000401147 81 ntBASIC0.45□□□□□ -2.34
CDC42EP3Q9UKI2 RNU6-982P-201ENST00000516216 102 ntBASIC0.45□□□□□ -2.34
CDC42EP3Q9UKI2 RNA5SP147-201ENST00000516493 109 ntBASIC0.45□□□□□ -2.34
CDC42EP3Q9UKI2 RNU6-175P-201ENST00000516896 107 ntBASIC0.45□□□□□ -2.34
CDC42EP3Q9UKI2 MIR499B-201ENST00000636498 73 ntBASIC0.45□□□□□ -2.34
CDC42EP3Q9UKI2 SNORA9.1-201ENST00000362412 131 ntBASIC0.44□□□□□ -2.34
CDC42EP3Q9UKI2 VTRNA1-3-201ENST00000365645 89 ntBASIC0.44□□□□□ -2.34
CDC42EP3Q9UKI2 SNORA50A-201ENST00000384225 134 ntBASIC0.44□□□□□ -2.34
CDC42EP3Q9UKI2 SNORD116-24-201ENST00000384549 92 ntBASIC0.44□□□□□ -2.34
CDC42EP3Q9UKI2 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
CDC42EP3Q9UKI2 AC021146.9-201ENST00000512503 156 ntBASIC0.44□□□□□ -2.34
CDC42EP3Q9UKI2 RNU6-656P-201ENST00000516785 107 ntBASIC0.44□□□□□ -2.34
CDC42EP3Q9UKI2 RNU7-188P-201ENST00000517063 64 ntBASIC0.44□□□□□ -2.34
CDC42EP3Q9UKI2 MIR4514-201ENST00000581410 57 ntBASIC0.44□□□□□ -2.34
CDC42EP3Q9UKI2 RNU6-1216P-201ENST00000362590 107 ntBASIC0.43□□□□□ -2.34
CDC42EP3Q9UKI2 RNU6-645P-201ENST00000364649 106 ntBASIC0.43□□□□□ -2.34
CDC42EP3Q9UKI2 SNORA15B-2-201ENST00000384058 135 ntBASIC0.43□□□□□ -2.34
CDC42EP3Q9UKI2 SNORA15B-1-201ENST00000384334 135 ntBASIC0.43□□□□□ -2.34
CDC42EP3Q9UKI2 AL157398.1-201ENST00000452981 186 ntBASIC0.43□□□□□ -2.34
CDC42EP3Q9UKI2 RNA5SP285-201ENST00000516619 119 ntBASIC0.43□□□□□ -2.34
CDC42EP3Q9UKI2 RNU6-539P-201ENST00000516665 103 ntBASIC0.43□□□□□ -2.34
CDC42EP3Q9UKI2 AC084368.1-201ENST00000620935 65 ntBASIC0.43□□□□□ -2.34
CDC42EP3Q9UKI2 RNA5SP499-201ENST00000363982 119 ntBASIC0.42□□□□□ -2.34
CDC42EP3Q9UKI2 RNU6-815P-201ENST00000384080 113 ntBASIC0.42□□□□□ -2.34
CDC42EP3Q9UKI2 RNU6-895P-201ENST00000384125 103 ntBASIC0.42□□□□□ -2.34
CDC42EP3Q9UKI2 RNU6-1162P-201ENST00000384443 104 ntBASIC0.42□□□□□ -2.34
CDC42EP3Q9UKI2 RNA5SP63-201ENST00000391225 112 ntBASIC0.42□□□□□ -2.34
CDC42EP3Q9UKI2 snoU13.13-201ENST00000458842 104 ntBASIC0.42□□□□□ -2.34
CDC42EP3Q9UKI2 SNORD2-201ENST00000459163 69 ntBASIC0.42□□□□□ -2.34
CDC42EP3Q9UKI2 AC139453.2-201ENST00000487255 133 ntBASIC0.42□□□□□ -2.34
CDC42EP3Q9UKI2 MIR6086-201ENST00000638065 55 ntBASIC0.42□□□□□ -2.34
CDC42EP3Q9UKI2 RNU6-1327P-201ENST00000365302 105 ntBASIC0.41□□□□□ -2.34
CDC42EP3Q9UKI2 RNU6-649P-201ENST00000384463 107 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms