Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 MIR508-201ENST00000384857 115 ntBASIC0.86□□□□□ -2.27
CXXC1Q9P0U4 AC098934.3-201ENST00000430450 190 ntBASIC0.86□□□□□ -2.27
CXXC1Q9P0U4 MIR3657-201ENST00000584818 117 ntBASIC0.86□□□□□ -2.27
CXXC1Q9P0U4 MIR6835-201ENST00000621552 64 ntBASIC0.86□□□□□ -2.27
CXXC1Q9P0U4 RNU6-604P-201ENST00000390917 100 ntBASIC0.85□□□□□ -2.27
CXXC1Q9P0U4 RNU6-848P-201ENST00000515948 107 ntBASIC0.85□□□□□ -2.27
CXXC1Q9P0U4 RNU6-617P-201ENST00000516147 107 ntBASIC0.85□□□□□ -2.27
CXXC1Q9P0U4 RNU6-473P-201ENST00000516164 107 ntBASIC0.85□□□□□ -2.27
CXXC1Q9P0U4 RNU6-1049P-201ENST00000516414 107 ntBASIC0.85□□□□□ -2.27
CXXC1Q9P0U4 RNU4-54P-201ENST00000516428 129 ntBASIC0.85□□□□□ -2.27
CXXC1Q9P0U4 RNA5SP347-201ENST00000362445 119 ntBASIC0.84□□□□□ -2.27
CXXC1Q9P0U4 SNORA2.1-201ENST00000363089 137 ntBASIC0.84□□□□□ -2.27
CXXC1Q9P0U4 RNU6-863P-201ENST00000515989 104 ntBASIC0.84□□□□□ -2.27
CXXC1Q9P0U4 RNU1-29P-201ENST00000606574 126 ntBASIC0.84□□□□□ -2.27
CXXC1Q9P0U4 RNU6-895P-201ENST00000384125 103 ntBASIC0.83□□□□□ -2.28
CXXC1Q9P0U4 SCARNA17.3-201ENST00000516381 125 ntBASIC0.83□□□□□ -2.28
CXXC1Q9P0U4 Y_RNA.125-201ENST00000363371 111 ntBASIC0.82□□□□□ -2.28
CXXC1Q9P0U4 MIR652-201ENST00000385278 98 ntBASIC0.82□□□□□ -2.28
CXXC1Q9P0U4 HMGN2P22-201ENST00000427588 175 ntBASIC0.82□□□□□ -2.28
CXXC1Q9P0U4 MIR548AE1-201ENST00000583292 70 ntBASIC0.82□□□□□ -2.28
CXXC1Q9P0U4 MIR2909-201ENST00000617113 69 ntBASIC0.82□□□□□ -2.28
CXXC1Q9P0U4 RNU6-990P-201ENST00000364385 104 ntBASIC0.81□□□□□ -2.28
CXXC1Q9P0U4 RNU6-351P-201ENST00000516097 100 ntBASIC0.8□□□□□ -2.28
CXXC1Q9P0U4 RNU6-881P-201ENST00000516813 102 ntBASIC0.8□□□□□ -2.28
CXXC1Q9P0U4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
CXXC1Q9P0U4 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
CXXC1Q9P0U4 SNORD115-22-201ENST00000364456 82 ntBASIC0.79□□□□□ -2.28
CXXC1Q9P0U4 SNORD45A-201ENST00000384512 84 ntBASIC0.79□□□□□ -2.28
CXXC1Q9P0U4 AC243829.3-201ENST00000622177 108 ntBASIC0.79□□□□□ -2.28
CXXC1Q9P0U4 Y_RNA.250-201ENST00000364542 110 ntBASIC0.78□□□□□ -2.28
CXXC1Q9P0U4 MIR760-201ENST00000390220 80 ntBASIC0.78□□□□□ -2.28
CXXC1Q9P0U4 RNA5SP147-201ENST00000516493 109 ntBASIC0.78□□□□□ -2.28
CXXC1Q9P0U4 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
CXXC1Q9P0U4 AC114801.3-201ENST00000510231 177 ntBASIC0.77□□□□□ -2.29
CXXC1Q9P0U4 MIR6755-201ENST00000619993 66 ntBASIC0.77□□□□□ -2.29
CXXC1Q9P0U4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CXXC1Q9P0U4 SNORD115-31-201ENST00000365318 82 ntBASIC0.76□□□□□ -2.29
CXXC1Q9P0U4 SNORD113.1-201ENST00000363280 73 ntBASIC0.75□□□□□ -2.29
CXXC1Q9P0U4 RNU6-649P-201ENST00000384463 107 ntBASIC0.75□□□□□ -2.29
CXXC1Q9P0U4 SNORD30.1-201ENST00000391309 70 ntBASIC0.75□□□□□ -2.29
CXXC1Q9P0U4 AC021146.9-201ENST00000512503 156 ntBASIC0.75□□□□□ -2.29
CXXC1Q9P0U4 AL627230.5-201ENST00000619807 58 ntBASIC0.75□□□□□ -2.29
CXXC1Q9P0U4 MIR20A-201ENST00000362279 71 ntBASIC0.74□□□□□ -2.29
CXXC1Q9P0U4 RNA5SP499-201ENST00000363982 119 ntBASIC0.74□□□□□ -2.29
CXXC1Q9P0U4 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
CXXC1Q9P0U4 RNA5SP285-201ENST00000516619 119 ntBASIC0.74□□□□□ -2.29
CXXC1Q9P0U4 SNORD114-29-201ENST00000364819 70 ntBASIC0.73□□□□□ -2.29
CXXC1Q9P0U4 SNORA63.6-201ENST00000364921 119 ntBASIC0.73□□□□□ -2.29
CXXC1Q9P0U4 RNA5SP128-201ENST00000365305 116 ntBASIC0.73□□□□□ -2.29
CXXC1Q9P0U4 MIR516B1-201ENST00000385211 90 ntBASIC0.73□□□□□ -2.29
CXXC1Q9P0U4 RNU6-663P-201ENST00000391105 106 ntBASIC0.73□□□□□ -2.29
CXXC1Q9P0U4 MTND4LP1-201ENST00000446263 157 ntBASIC0.73□□□□□ -2.29
CXXC1Q9P0U4 RNU7-129P-201ENST00000516128 62 ntBASIC0.73□□□□□ -2.29
CXXC1Q9P0U4 SNORD44.1-201ENST00000363202 61 ntBASIC0.72□□□□□ -2.29
CXXC1Q9P0U4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.72□□□□□ -2.29
CXXC1Q9P0U4 RNU6-540P-201ENST00000384622 101 ntBASIC0.72□□□□□ -2.29
CXXC1Q9P0U4 AC244090.1-201ENST00000441884 93 ntBASIC0.72□□□□□ -2.29
CXXC1Q9P0U4 RNU6-1216P-201ENST00000362590 107 ntBASIC0.71□□□□□ -2.3
CXXC1Q9P0U4 RNU6-1162P-201ENST00000384443 104 ntBASIC0.71□□□□□ -2.3
CXXC1Q9P0U4 MIR501-201ENST00000390204 84 ntBASIC0.71□□□□□ -2.3
CXXC1Q9P0U4 MIR4677-201ENST00000584153 80 ntBASIC0.71□□□□□ -2.3
CXXC1Q9P0U4 SNORA68.3-201ENST00000515906 83 ntBASIC0.7□□□□□ -2.3
CXXC1Q9P0U4 RNU6-1232P-201ENST00000516299 86 ntBASIC0.7□□□□□ -2.3
CXXC1Q9P0U4 RNU6-539P-201ENST00000516665 103 ntBASIC0.7□□□□□ -2.3
CXXC1Q9P0U4 SNORA40.17-201ENST00000517256 115 ntBASIC0.7□□□□□ -2.3
CXXC1Q9P0U4 MIR5087-201ENST00000635826 76 ntBASIC0.7□□□□□ -2.3
CXXC1Q9P0U4 MIR548E-201ENST00000408287 88 ntBASIC0.69□□□□□ -2.3
CXXC1Q9P0U4 MIR548AD-201ENST00000584780 82 ntBASIC0.69□□□□□ -2.3
CXXC1Q9P0U4 AC084368.1-201ENST00000620935 65 ntBASIC0.69□□□□□ -2.3
CXXC1Q9P0U4 MIR6739-201ENST00000622461 75 ntBASIC0.69□□□□□ -2.3
CXXC1Q9P0U4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.68□□□□□ -2.3
CXXC1Q9P0U4 RNU6-645P-201ENST00000364649 106 ntBASIC0.68□□□□□ -2.3
CXXC1Q9P0U4 SNORA15B-2-201ENST00000384058 135 ntBASIC0.68□□□□□ -2.3
CXXC1Q9P0U4 SNORA15B-1-201ENST00000384334 135 ntBASIC0.68□□□□□ -2.3
CXXC1Q9P0U4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.68□□□□□ -2.3
CXXC1Q9P0U4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.68□□□□□ -2.3
CXXC1Q9P0U4 snoU13.13-201ENST00000458842 104 ntBASIC0.68□□□□□ -2.3
CXXC1Q9P0U4 SNORD2-201ENST00000459163 69 ntBASIC0.68□□□□□ -2.3
CXXC1Q9P0U4 SNORA9.1-201ENST00000362412 131 ntBASIC0.67□□□□□ -2.3
CXXC1Q9P0U4 RNU6-982P-201ENST00000516216 102 ntBASIC0.67□□□□□ -2.3
CXXC1Q9P0U4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.67□□□□□ -2.3
CXXC1Q9P0U4 MIRLET7D-201ENST00000362263 87 ntBASIC0.66□□□□□ -2.3
CXXC1Q9P0U4 MIR582-201ENST00000365731 98 ntBASIC0.66□□□□□ -2.3
CXXC1Q9P0U4 SNORA62.5-201ENST00000516634 120 ntBASIC0.66□□□□□ -2.3
CXXC1Q9P0U4 RNU7-188P-201ENST00000517063 64 ntBASIC0.66□□□□□ -2.3
CXXC1Q9P0U4 RNU6-668P-201ENST00000364180 107 ntBASIC0.65□□□□□ -2.31
CXXC1Q9P0U4 RNA5SP63-201ENST00000391225 112 ntBASIC0.65□□□□□ -2.31
CXXC1Q9P0U4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.64□□□□□ -2.31
CXXC1Q9P0U4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
CXXC1Q9P0U4 MIR103A1-201ENST00000362165 78 ntBASIC0.64□□□□□ -2.31
CXXC1Q9P0U4 MIR521-2-201ENST00000384818 87 ntBASIC0.64□□□□□ -2.31
CXXC1Q9P0U4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
CXXC1Q9P0U4 AC243829.6-201ENST00000612652 106 ntBASIC0.64□□□□□ -2.31
CXXC1Q9P0U4 U6.111-201ENST00000636093 83 ntBASIC0.64□□□□□ -2.31
CXXC1Q9P0U4 MIR499B-201ENST00000636498 73 ntBASIC0.64□□□□□ -2.31
CXXC1Q9P0U4 AC139453.2-201ENST00000487255 133 ntBASIC0.63□□□□□ -2.31
CXXC1Q9P0U4 RNU6-590P-201ENST00000365039 107 ntBASIC0.61□□□□□ -2.31
CXXC1Q9P0U4 MIR1265-201ENST00000408444 86 ntBASIC0.61□□□□□ -2.31
CXXC1Q9P0U4 MIR4514-201ENST00000581410 57 ntBASIC0.61□□□□□ -2.31
CXXC1Q9P0U4 SNORA75.1-201ENST00000391130 148 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms