Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 RNA5SP285-201ENST00000516619 119 ntBASIC-0.23□□□□□ -2.45
DDX56Q9NY93 AP000676.1-201ENST00000533307 52 ntBASIC-0.23□□□□□ -2.45
DDX56Q9NY93 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.23□□□□□ -2.45
DDX56Q9NY93 RNU6-624P-201ENST00000363411 107 ntBASIC-0.24□□□□□ -2.45
DDX56Q9NY93 SNORD114-12-201ENST00000365400 75 ntBASIC-0.24□□□□□ -2.45
DDX56Q9NY93 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.24□□□□□ -2.45
DDX56Q9NY93 AC244250.2-201ENST00000418731 148 ntBASIC-0.24□□□□□ -2.45
DDX56Q9NY93 SNORD2-201ENST00000459163 69 ntBASIC-0.24□□□□□ -2.45
DDX56Q9NY93 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.24□□□□□ -2.45
DDX56Q9NY93 IGLL4P-201ENST00000614590 133 ntBASIC-0.24□□□□□ -2.45
DDX56Q9NY93 RNU6-260P-201ENST00000384092 107 ntBASIC-0.25□□□□□ -2.45
DDX56Q9NY93 MIR203A-201ENST00000384836 110 ntBASIC-0.25□□□□□ -2.45
DDX56Q9NY93 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.25□□□□□ -2.45
DDX56Q9NY93 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.25□□□□□ -2.45
DDX56Q9NY93 RNU6-592P-201ENST00000411333 103 ntBASIC-0.25□□□□□ -2.45
DDX56Q9NY93 AL691482.2-201ENST00000457453 84 ntBASIC-0.25□□□□□ -2.45
DDX56Q9NY93 RNU6-274P-201ENST00000459566 107 ntBASIC-0.25□□□□□ -2.45
DDX56Q9NY93 RNY1P1-201ENST00000364372 112 ntBASIC-0.26□□□□□ -2.45
DDX56Q9NY93 SNORD49B-201ENST00000365172 72 ntBASIC-0.26□□□□□ -2.45
DDX56Q9NY93 MIR5582-201ENST00000579697 68 ntBASIC-0.26□□□□□ -2.45
DDX56Q9NY93 MIR6509-201ENST00000614603 85 ntBASIC-0.26□□□□□ -2.45
DDX56Q9NY93 SNORD115-25-201ENST00000362619 82 ntBASIC-0.27□□□□□ -2.45
DDX56Q9NY93 SNORA18.1-201ENST00000363418 128 ntBASIC-0.27□□□□□ -2.45
DDX56Q9NY93 RNU6-340P-201ENST00000364005 107 ntBASIC-0.27□□□□□ -2.45
DDX56Q9NY93 snoU13.13-201ENST00000458842 104 ntBASIC-0.27□□□□□ -2.45
DDX56Q9NY93 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.27□□□□□ -2.45
DDX56Q9NY93 AC145423.2-201ENST00000610631 239 ntBASIC-0.27□□□□□ -2.45
DDX56Q9NY93 MIR655-201ENST00000362159 97 ntBASIC-0.28□□□□□ -2.45
DDX56Q9NY93 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.28□□□□□ -2.45
DDX56Q9NY93 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.28□□□□□ -2.45
DDX56Q9NY93 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.28□□□□□ -2.45
DDX56Q9NY93 SNORA63.6-201ENST00000364921 119 ntBASIC-0.28□□□□□ -2.45
DDX56Q9NY93 AC006160.2-201ENST00000637708 154 ntBASIC-0.28□□□□□ -2.45
DDX56Q9NY93 RNU6-294P-201ENST00000364999 102 ntBASIC-0.29□□□□□ -2.46
DDX56Q9NY93 YWHAEP3-201ENST00000582767 121 ntBASIC-0.29□□□□□ -2.46
DDX56Q9NY93 RNU6-455P-201ENST00000384681 107 ntBASIC-0.3□□□□□ -2.46
DDX56Q9NY93 SNORA40.17-201ENST00000517256 115 ntBASIC-0.3□□□□□ -2.46
DDX56Q9NY93 MIR6759-201ENST00000638110 65 ntBASIC-0.3□□□□□ -2.46
DDX56Q9NY93 RNU6-681P-201ENST00000364012 104 ntBASIC-0.31□□□□□ -2.46
DDX56Q9NY93 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.31□□□□□ -2.46
DDX56Q9NY93 MIR214-201ENST00000385214 110 ntBASIC-0.31□□□□□ -2.46
DDX56Q9NY93 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.31□□□□□ -2.46
DDX56Q9NY93 SNORD4A-201ENST00000459174 72 ntBASIC-0.31□□□□□ -2.46
DDX56Q9NY93 AC021146.9-201ENST00000512503 156 ntBASIC-0.31□□□□□ -2.46
DDX56Q9NY93 RNA5SP147-201ENST00000516493 109 ntBASIC-0.31□□□□□ -2.46
DDX56Q9NY93 MIR3657-201ENST00000584818 117 ntBASIC-0.32□□□□□ -2.46
DDX56Q9NY93 RNU6-557P-201ENST00000516842 110 ntBASIC-0.33□□□□□ -2.46
DDX56Q9NY93 IGLVI-20-201ENST00000519296 130 ntBASIC-0.33□□□□□ -2.46
DDX56Q9NY93 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
DDX56Q9NY93 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.34□□□□□ -2.46
DDX56Q9NY93 MIR9-2-201ENST00000384838 87 ntBASIC-0.34□□□□□ -2.46
DDX56Q9NY93 MIR5588-201ENST00000581890 63 ntBASIC-0.34□□□□□ -2.46
DDX56Q9NY93 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.34□□□□□ -2.46
DDX56Q9NY93 RNU6-502P-201ENST00000362419 108 ntBASIC-0.35□□□□□ -2.47
DDX56Q9NY93 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.35□□□□□ -2.47
DDX56Q9NY93 SNORA2.1-201ENST00000363089 137 ntBASIC-0.35□□□□□ -2.47
DDX56Q9NY93 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.35□□□□□ -2.47
DDX56Q9NY93 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.36□□□□□ -2.47
DDX56Q9NY93 MIR494-201ENST00000349529 81 ntBASIC-0.36□□□□□ -2.47
DDX56Q9NY93 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.36□□□□□ -2.47
DDX56Q9NY93 RNU6-478P-201ENST00000363904 110 ntBASIC-0.36□□□□□ -2.47
DDX56Q9NY93 RNU6-686P-201ENST00000364839 107 ntBASIC-0.36□□□□□ -2.47
DDX56Q9NY93 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.36□□□□□ -2.47
DDX56Q9NY93 RNU6-900P-201ENST00000384498 102 ntBASIC-0.36□□□□□ -2.47
DDX56Q9NY93 RNU6-129P-201ENST00000391022 107 ntBASIC-0.36□□□□□ -2.47
DDX56Q9NY93 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.36□□□□□ -2.47
DDX56Q9NY93 RNU6-752P-201ENST00000516376 102 ntBASIC-0.36□□□□□ -2.47
DDX56Q9NY93 RNA5SP170-201ENST00000517150 101 ntBASIC-0.36□□□□□ -2.47
DDX56Q9NY93 RNU6-979P-201ENST00000383896 107 ntBASIC-0.37□□□□□ -2.47
DDX56Q9NY93 MIR3666-201ENST00000607845 111 ntBASIC-0.37□□□□□ -2.47
DDX56Q9NY93 SNORD114-31-201ENST00000363219 75 ntBASIC-0.38□□□□□ -2.47
DDX56Q9NY93 MIR450A2-201ENST00000385022 100 ntBASIC-0.38□□□□□ -2.47
DDX56Q9NY93 MIR6773-201ENST00000612812 74 ntBASIC-0.38□□□□□ -2.47
DDX56Q9NY93 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.39□□□□□ -2.47
DDX56Q9NY93 AC022137.1-201ENST00000483735 151 ntBASIC-0.39□□□□□ -2.47
DDX56Q9NY93 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.39□□□□□ -2.47
DDX56Q9NY93 MIR4263-201ENST00000584745 83 ntBASIC-0.39□□□□□ -2.47
DDX56Q9NY93 U6.96-201ENST00000636425 70 ntBASIC-0.39□□□□□ -2.47
DDX56Q9NY93 RNU6-337P-201ENST00000391243 106 ntBASIC-0.4□□□□□ -2.47
DDX56Q9NY93 RNU7-55P-201ENST00000459426 62 ntBASIC-0.4□□□□□ -2.47
DDX56Q9NY93 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.41□□□□□ -2.48
DDX56Q9NY93 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.41□□□□□ -2.48
DDX56Q9NY93 uc_338.36-201ENST00000622331 158 ntBASIC-0.41□□□□□ -2.48
DDX56Q9NY93 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.42□□□□□ -2.48
DDX56Q9NY93 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.42□□□□□ -2.48
DDX56Q9NY93 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.42□□□□□ -2.48
DDX56Q9NY93 RNA5SP300-201ENST00000391197 107 ntBASIC-0.42□□□□□ -2.48
DDX56Q9NY93 RNU6-303P-201ENST00000517091 106 ntBASIC-0.42□□□□□ -2.48
DDX56Q9NY93 MIR4645-201ENST00000583158 77 ntBASIC-0.42□□□□□ -2.48
DDX56Q9NY93 AL590491.3-201ENST00000610731 82 ntBASIC-0.42□□□□□ -2.48
DDX56Q9NY93 RNU6-901P-201ENST00000384593 106 ntBASIC-0.43□□□□□ -2.48
DDX56Q9NY93 RNU6-320P-201ENST00000516511 106 ntBASIC-0.43□□□□□ -2.48
DDX56Q9NY93 MIR5589-201ENST00000579442 60 ntBASIC-0.43□□□□□ -2.48
DDX56Q9NY93 MIR4788-201ENST00000639104 80 ntBASIC-0.43□□□□□ -2.48
DDX56Q9NY93 SNORA33.1-201ENST00000364957 130 ntBASIC-0.44□□□□□ -2.48
DDX56Q9NY93 RNU7-171P-201ENST00000459581 62 ntBASIC-0.44□□□□□ -2.48
DDX56Q9NY93 MIR8064-201ENST00000612863 90 ntBASIC-0.44□□□□□ -2.48
DDX56Q9NY93 RNU6-330P-201ENST00000363015 107 ntBASIC-0.45□□□□□ -2.48
DDX56Q9NY93 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.45□□□□□ -2.48
DDX56Q9NY93 MIRLET7B-201ENST00000385140 83 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 219.1 ms