Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
TMEM39AQ9NV64 Y_RNA.423-201ENST00000384057 113 ntBASIC0.83□□□□□ -2.28
TMEM39AQ9NV64 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
TMEM39AQ9NV64 HMGN2P22-201ENST00000427588 175 ntBASIC0.83□□□□□ -2.28
TMEM39AQ9NV64 RNU6-982P-201ENST00000516216 102 ntBASIC0.83□□□□□ -2.28
TMEM39AQ9NV64 SNORA40.17-201ENST00000517256 115 ntBASIC0.83□□□□□ -2.28
TMEM39AQ9NV64 uc_338.10-201ENST00000621872 182 ntBASIC0.83□□□□□ -2.28
TMEM39AQ9NV64 RNU6-1216P-201ENST00000362590 107 ntBASIC0.82□□□□□ -2.28
TMEM39AQ9NV64 Y_RNA.178-201ENST00000363832 102 ntBASIC0.82□□□□□ -2.28
TMEM39AQ9NV64 SNORA2A-201ENST00000383885 135 ntBASIC0.82□□□□□ -2.28
TMEM39AQ9NV64 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
TMEM39AQ9NV64 RNU6-229P-201ENST00000516614 102 ntBASIC0.82□□□□□ -2.28
TMEM39AQ9NV64 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
TMEM39AQ9NV64 U6.111-201ENST00000636093 83 ntBASIC0.81□□□□□ -2.28
TMEM39AQ9NV64 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.8□□□□□ -2.28
TMEM39AQ9NV64 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
TMEM39AQ9NV64 RNA5SP193-201ENST00000410353 107 ntBASIC0.8□□□□□ -2.28
TMEM39AQ9NV64 AC098934.3-201ENST00000430450 190 ntBASIC0.8□□□□□ -2.28
TMEM39AQ9NV64 MIR4711-201ENST00000578274 70 ntBASIC0.8□□□□□ -2.28
TMEM39AQ9NV64 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TMEM39AQ9NV64 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
TMEM39AQ9NV64 RNA5SP347-201ENST00000362445 119 ntBASIC0.79□□□□□ -2.28
TMEM39AQ9NV64 Y_RNA.125-201ENST00000363371 111 ntBASIC0.79□□□□□ -2.28
TMEM39AQ9NV64 RNU6-590P-201ENST00000365039 107 ntBASIC0.79□□□□□ -2.28
TMEM39AQ9NV64 RNU6-788P-201ENST00000390967 104 ntBASIC0.79□□□□□ -2.28
TMEM39AQ9NV64 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
TMEM39AQ9NV64 U7.6-201ENST00000610841 64 ntBASIC0.79□□□□□ -2.28
TMEM39AQ9NV64 AL109933.3-201ENST00000619095 188 ntBASIC0.79□□□□□ -2.28
TMEM39AQ9NV64 snoU13.13-201ENST00000458842 104 ntBASIC0.78□□□□□ -2.28
TMEM39AQ9NV64 Y_RNA.68-201ENST00000362881 102 ntBASIC0.77□□□□□ -2.29
TMEM39AQ9NV64 Y_RNA.250-201ENST00000364542 110 ntBASIC0.77□□□□□ -2.29
TMEM39AQ9NV64 RNU6-645P-201ENST00000364649 106 ntBASIC0.77□□□□□ -2.29
TMEM39AQ9NV64 RNU6-945P-201ENST00000383947 107 ntBASIC0.77□□□□□ -2.29
TMEM39AQ9NV64 SNORD116-24-201ENST00000384549 92 ntBASIC0.77□□□□□ -2.29
TMEM39AQ9NV64 RNU6-630P-201ENST00000391258 106 ntBASIC0.77□□□□□ -2.29
TMEM39AQ9NV64 MTND4LP1-201ENST00000446263 157 ntBASIC0.77□□□□□ -2.29
TMEM39AQ9NV64 AC021146.9-201ENST00000512503 156 ntBASIC0.77□□□□□ -2.29
TMEM39AQ9NV64 MIR8087-201ENST00000612745 78 ntBASIC0.77□□□□□ -2.29
TMEM39AQ9NV64 MIR6755-201ENST00000619993 66 ntBASIC0.77□□□□□ -2.29
TMEM39AQ9NV64 RNU6-800P-201ENST00000384473 103 ntBASIC0.76□□□□□ -2.29
TMEM39AQ9NV64 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.76□□□□□ -2.29
TMEM39AQ9NV64 RNU6-1232P-201ENST00000516299 86 ntBASIC0.76□□□□□ -2.29
TMEM39AQ9NV64 MIR6739-201ENST00000622461 75 ntBASIC0.76□□□□□ -2.29
TMEM39AQ9NV64 MIR582-201ENST00000365731 98 ntBASIC0.75□□□□□ -2.29
TMEM39AQ9NV64 RNU6-848P-201ENST00000515948 107 ntBASIC0.75□□□□□ -2.29
TMEM39AQ9NV64 RNU6-617P-201ENST00000516147 107 ntBASIC0.75□□□□□ -2.29
TMEM39AQ9NV64 RNU6-473P-201ENST00000516164 107 ntBASIC0.75□□□□□ -2.29
TMEM39AQ9NV64 RNU6-1049P-201ENST00000516414 107 ntBASIC0.75□□□□□ -2.29
TMEM39AQ9NV64 Y_RNA.443-201ENST00000384135 111 ntBASIC0.74□□□□□ -2.29
TMEM39AQ9NV64 AC243829.3-201ENST00000622177 108 ntBASIC0.74□□□□□ -2.29
TMEM39AQ9NV64 RNU6-668P-201ENST00000364180 107 ntBASIC0.73□□□□□ -2.29
TMEM39AQ9NV64 SNORA63.6-201ENST00000364921 119 ntBASIC0.73□□□□□ -2.29
TMEM39AQ9NV64 RNU6-1162P-201ENST00000384443 104 ntBASIC0.73□□□□□ -2.29
TMEM39AQ9NV64 MIR760-201ENST00000390220 80 ntBASIC0.73□□□□□ -2.29
TMEM39AQ9NV64 MIR548E-201ENST00000408287 88 ntBASIC0.73□□□□□ -2.29
TMEM39AQ9NV64 MIR330-201ENST00000362196 94 ntBASIC0.72□□□□□ -2.29
TMEM39AQ9NV64 RNA5SP257-201ENST00000363023 116 ntBASIC0.72□□□□□ -2.29
TMEM39AQ9NV64 MIR516B1-201ENST00000385211 90 ntBASIC0.72□□□□□ -2.29
TMEM39AQ9NV64 RNU6-656P-201ENST00000516785 107 ntBASIC0.72□□□□□ -2.29
TMEM39AQ9NV64 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.72□□□□□ -2.29
TMEM39AQ9NV64 MIR20A-201ENST00000362279 71 ntBASIC0.71□□□□□ -2.3
TMEM39AQ9NV64 Y_RNA.386-201ENST00000383913 105 ntBASIC0.71□□□□□ -2.3
TMEM39AQ9NV64 RNA5SP121-201ENST00000516537 101 ntBASIC0.71□□□□□ -2.3
TMEM39AQ9NV64 AC005520.4-201ENST00000604337 90 ntBASIC0.71□□□□□ -2.3
TMEM39AQ9NV64 SNORD44.1-201ENST00000363202 61 ntBASIC0.7□□□□□ -2.3
TMEM39AQ9NV64 SNORA25.4-201ENST00000363666 124 ntBASIC0.7□□□□□ -2.3
TMEM39AQ9NV64 SNORA15B-2-201ENST00000384058 135 ntBASIC0.7□□□□□ -2.3
TMEM39AQ9NV64 SNORA15B-1-201ENST00000384334 135 ntBASIC0.7□□□□□ -2.3
TMEM39AQ9NV64 MIR521-2-201ENST00000384818 87 ntBASIC0.7□□□□□ -2.3
TMEM39AQ9NV64 MIR501-201ENST00000390204 84 ntBASIC0.7□□□□□ -2.3
TMEM39AQ9NV64 MIR1197-201ENST00000408818 88 ntBASIC0.7□□□□□ -2.3
TMEM39AQ9NV64 AC244090.1-201ENST00000441884 93 ntBASIC0.7□□□□□ -2.3
TMEM39AQ9NV64 RNU6-863P-201ENST00000515989 104 ntBASIC0.7□□□□□ -2.3
TMEM39AQ9NV64 MIR4677-201ENST00000584153 80 ntBASIC0.7□□□□□ -2.3
TMEM39AQ9NV64 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
TMEM39AQ9NV64 MIR5087-201ENST00000635826 76 ntBASIC0.69□□□□□ -2.3
TMEM39AQ9NV64 SNORD114-29-201ENST00000364819 70 ntBASIC0.68□□□□□ -2.3
TMEM39AQ9NV64 Y_RNA.633-201ENST00000459107 95 ntBASIC0.68□□□□□ -2.3
TMEM39AQ9NV64 AC125388.1-201ENST00000459631 156 ntBASIC0.68□□□□□ -2.3
TMEM39AQ9NV64 RNA5SP128-201ENST00000365305 116 ntBASIC0.67□□□□□ -2.3
TMEM39AQ9NV64 Y_RNA.340-201ENST00000365330 92 ntBASIC0.67□□□□□ -2.3
TMEM39AQ9NV64 RNU7-129P-201ENST00000516128 62 ntBASIC0.67□□□□□ -2.3
TMEM39AQ9NV64 RNU7-188P-201ENST00000517063 64 ntBASIC0.67□□□□□ -2.3
TMEM39AQ9NV64 MIR548AD-201ENST00000584780 82 ntBASIC0.67□□□□□ -2.3
TMEM39AQ9NV64 RNA5SP499-201ENST00000363982 119 ntBASIC0.66□□□□□ -2.3
TMEM39AQ9NV64 Y_RNA.433-201ENST00000384089 102 ntBASIC0.66□□□□□ -2.3
TMEM39AQ9NV64 SNORA68.3-201ENST00000515906 83 ntBASIC0.66□□□□□ -2.3
TMEM39AQ9NV64 AC084368.1-201ENST00000620935 65 ntBASIC0.66□□□□□ -2.3
TMEM39AQ9NV64 MIR499B-201ENST00000636498 73 ntBASIC0.66□□□□□ -2.3
TMEM39AQ9NV64 SNORA33.1-201ENST00000364957 130 ntBASIC0.65□□□□□ -2.31
TMEM39AQ9NV64 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.65□□□□□ -2.31
TMEM39AQ9NV64 AL157398.1-201ENST00000452981 186 ntBASIC0.64□□□□□ -2.31
TMEM39AQ9NV64 MIR103A1-201ENST00000362165 78 ntBASIC0.63□□□□□ -2.31
TMEM39AQ9NV64 RNU6-1089P-201ENST00000516473 104 ntBASIC0.63□□□□□ -2.31
TMEM39AQ9NV64 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
TMEM39AQ9NV64 RNA5SP62-201ENST00000363457 110 ntBASIC0.62□□□□□ -2.31
TMEM39AQ9NV64 MIR548C-201ENST00000384815 97 ntBASIC0.62□□□□□ -2.31
TMEM39AQ9NV64 RNU6-471P-201ENST00000383944 106 ntBASIC0.61□□□□□ -2.31
TMEM39AQ9NV64 U6.96-201ENST00000636425 70 ntBASIC0.61□□□□□ -2.31
TMEM39AQ9NV64 MIRLET7D-201ENST00000362263 87 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 236.1 ms