Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 RNU6-686P-201ENST00000364839 107 ntBASIC0.15□□□□□ -2.39
TDP1Q9NUW8 RNU6-274P-201ENST00000459566 107 ntBASIC0.15□□□□□ -2.39
TDP1Q9NUW8 YWHAEP3-201ENST00000582767 121 ntBASIC0.15□□□□□ -2.39
TDP1Q9NUW8 RN7SL660P-201ENST00000614852 299 ntBASIC0.15□□□□□ -2.39
TDP1Q9NUW8 SNORD114-9-201ENST00000364370 72 ntBASIC0.14□□□□□ -2.39
TDP1Q9NUW8 MIR892B-201ENST00000401279 77 ntBASIC0.14□□□□□ -2.39
TDP1Q9NUW8 AC244090.1-201ENST00000441884 93 ntBASIC0.14□□□□□ -2.39
TDP1Q9NUW8 MIRLET7A1-201ENST00000362295 80 ntBASIC0.13□□□□□ -2.39
TDP1Q9NUW8 MIR582-201ENST00000365731 98 ntBASIC0.13□□□□□ -2.39
TDP1Q9NUW8 Y_RNA.388-201ENST00000383919 113 ntBASIC0.13□□□□□ -2.39
TDP1Q9NUW8 MIR593-201ENST00000384856 100 ntBASIC0.13□□□□□ -2.39
TDP1Q9NUW8 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
TDP1Q9NUW8 MIR1302-4-201ENST00000408701 150 ntBASIC0.13□□□□□ -2.39
TDP1Q9NUW8 RNU6-175P-201ENST00000516896 107 ntBASIC0.13□□□□□ -2.39
TDP1Q9NUW8 RNU6-681P-201ENST00000364012 104 ntBASIC0.12□□□□□ -2.39
TDP1Q9NUW8 RNU6-1039P-201ENST00000383931 107 ntBASIC0.12□□□□□ -2.39
TDP1Q9NUW8 MIR4666B-201ENST00000578142 81 ntBASIC0.12□□□□□ -2.39
TDP1Q9NUW8 MIR4743-201ENST00000584576 69 ntBASIC0.12□□□□□ -2.39
TDP1Q9NUW8 RNU6-990P-201ENST00000364385 104 ntBASIC0.11□□□□□ -2.39
TDP1Q9NUW8 MIR145-201ENST00000384967 88 ntBASIC0.11□□□□□ -2.39
TDP1Q9NUW8 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
TDP1Q9NUW8 MIR548E-201ENST00000408287 88 ntBASIC0.11□□□□□ -2.39
TDP1Q9NUW8 RNA5SP163-201ENST00000410304 99 ntBASIC0.11□□□□□ -2.39
TDP1Q9NUW8 AL691482.2-201ENST00000457453 84 ntBASIC0.11□□□□□ -2.39
TDP1Q9NUW8 RNU6-315P-201ENST00000362666 107 ntBASIC0.1□□□□□ -2.39
TDP1Q9NUW8 SNORD114-5-201ENST00000362928 70 ntBASIC0.1□□□□□ -2.39
TDP1Q9NUW8 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
TDP1Q9NUW8 MIR6509-201ENST00000614603 85 ntBASIC0.1□□□□□ -2.39
TDP1Q9NUW8 MIR6514-201ENST00000622549 70 ntBASIC0.1□□□□□ -2.39
TDP1Q9NUW8 RNA5SP173-201ENST00000364857 136 ntBASIC0.09□□□□□ -2.4
TDP1Q9NUW8 RNU6-303P-201ENST00000517091 106 ntBASIC0.09□□□□□ -2.4
TDP1Q9NUW8 RNU6-787P-201ENST00000384032 107 ntBASIC0.08□□□□□ -2.4
TDP1Q9NUW8 RNU6-752P-201ENST00000516376 102 ntBASIC0.08□□□□□ -2.4
TDP1Q9NUW8 RNU6-180P-201ENST00000516697 61 ntBASIC0.08□□□□□ -2.4
TDP1Q9NUW8 MIR5190-201ENST00000581537 80 ntBASIC0.08□□□□□ -2.4
TDP1Q9NUW8 MIR1245B-201ENST00000636115 69 ntBASIC0.08□□□□□ -2.4
TDP1Q9NUW8 RNU6-573P-201ENST00000383938 106 ntBASIC0.07□□□□□ -2.4
TDP1Q9NUW8 RNU6-260P-201ENST00000384092 107 ntBASIC0.07□□□□□ -2.4
TDP1Q9NUW8 MIR203A-201ENST00000384836 110 ntBASIC0.07□□□□□ -2.4
TDP1Q9NUW8 Y_RNA.681-201ENST00000516445 113 ntBASIC0.07□□□□□ -2.4
TDP1Q9NUW8 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.07□□□□□ -2.4
TDP1Q9NUW8 MIR4712-201ENST00000583750 82 ntBASIC0.07□□□□□ -2.4
TDP1Q9NUW8 RNU6-1036P-201ENST00000383959 104 ntBASIC0.06□□□□□ -2.4
TDP1Q9NUW8 Y_RNA.532-201ENST00000384590 113 ntBASIC0.06□□□□□ -2.4
TDP1Q9NUW8 MIR106A-201ENST00000384870 81 ntBASIC0.06□□□□□ -2.4
TDP1Q9NUW8 SNORA40.17-201ENST00000517256 115 ntBASIC0.06□□□□□ -2.4
TDP1Q9NUW8 CR383656.4-201ENST00000546909 122 ntBASIC0.06□□□□□ -2.4
TDP1Q9NUW8 Y_RNA.219-201ENST00000364232 113 ntBASIC0.05□□□□□ -2.4
TDP1Q9NUW8 Y_RNA.313-201ENST00000365095 103 ntBASIC0.05□□□□□ -2.4
TDP1Q9NUW8 RNU6-380P-201ENST00000410207 107 ntBASIC0.05□□□□□ -2.4
TDP1Q9NUW8 RNU7-159P-201ENST00000459284 62 ntBASIC0.05□□□□□ -2.4
TDP1Q9NUW8 MIR3657-201ENST00000584818 117 ntBASIC0.05□□□□□ -2.4
TDP1Q9NUW8 SNORA63.6-201ENST00000364921 119 ntBASIC0.04□□□□□ -2.4
TDP1Q9NUW8 AC074348.1-201ENST00000426503 132 ntBASIC0.04□□□□□ -2.4
TDP1Q9NUW8 RNU7-165P-201ENST00000458864 60 ntBASIC0.04□□□□□ -2.4
TDP1Q9NUW8 SNORA49-201ENST00000386157 136 ntBASIC0.03□□□□□ -2.4
TDP1Q9NUW8 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.03□□□□□ -2.4
TDP1Q9NUW8 MIR148A-201ENST00000362215 68 ntBASIC0.02□□□□□ -2.41
TDP1Q9NUW8 Y_RNA.94-201ENST00000363068 106 ntBASIC0.02□□□□□ -2.41
TDP1Q9NUW8 SNORD2-201ENST00000459163 69 ntBASIC0.02□□□□□ -2.41
TDP1Q9NUW8 AC021146.9-201ENST00000512503 156 ntBASIC0.02□□□□□ -2.41
TDP1Q9NUW8 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.02□□□□□ -2.41
TDP1Q9NUW8 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
TDP1Q9NUW8 MIR3202-2-201ENST00000635980 79 ntBASIC0.02□□□□□ -2.41
TDP1Q9NUW8 MIR1297-201ENST00000637311 77 ntBASIC0.02□□□□□ -2.41
TDP1Q9NUW8 RNU6-1094P-201ENST00000362416 104 ntBASIC0.01□□□□□ -2.41
TDP1Q9NUW8 RNU6-330P-201ENST00000363015 107 ntBASIC0.01□□□□□ -2.41
TDP1Q9NUW8 SNORA2.1-201ENST00000363089 137 ntBASIC0.01□□□□□ -2.41
TDP1Q9NUW8 RNA5SP147-201ENST00000516493 109 ntBASIC0.01□□□□□ -2.41
TDP1Q9NUW8 RNU6-807P-201ENST00000516805 107 ntBASIC0.01□□□□□ -2.41
TDP1Q9NUW8 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
TDP1Q9NUW8 MIR4484-201ENST00000582855 83 ntBASIC0.01□□□□□ -2.41
TDP1Q9NUW8 MIR4290-201ENST00000583807 95 ntBASIC0.01□□□□□ -2.41
TDP1Q9NUW8 RNA5SP98-201ENST00000363158 137 ntBASIC0□□□□□ -2.41
TDP1Q9NUW8 snoU13.13-201ENST00000458842 104 ntBASIC0□□□□□ -2.41
TDP1Q9NUW8 RNU6-929P-201ENST00000384429 107 ntBASIC-0.01□□□□□ -2.41
TDP1Q9NUW8 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.02□□□□□ -2.41
TDP1Q9NUW8 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.02□□□□□ -2.41
TDP1Q9NUW8 SNORA8.1-201ENST00000384250 140 ntBASIC-0.02□□□□□ -2.41
TDP1Q9NUW8 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.02□□□□□ -2.41
TDP1Q9NUW8 MIR371B-201ENST00000638082 66 ntBASIC-0.02□□□□□ -2.41
TDP1Q9NUW8 RNU6-228P-201ENST00000362700 106 ntBASIC-0.03□□□□□ -2.41
TDP1Q9NUW8 MIR3675-201ENST00000583661 73 ntBASIC-0.03□□□□□ -2.41
TDP1Q9NUW8 AC145423.2-201ENST00000610631 239 ntBASIC-0.03□□□□□ -2.41
TDP1Q9NUW8 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
TDP1Q9NUW8 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.04□□□□□ -2.42
TDP1Q9NUW8 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.04□□□□□ -2.42
TDP1Q9NUW8 MIR6507-201ENST00000613630 70 ntBASIC-0.04□□□□□ -2.42
TDP1Q9NUW8 SNORD115-25-201ENST00000362619 82 ntBASIC-0.05□□□□□ -2.42
TDP1Q9NUW8 AP000676.1-201ENST00000533307 52 ntBASIC-0.05□□□□□ -2.42
TDP1Q9NUW8 SCARNA18B-201ENST00000458806 135 ntBASIC-0.06□□□□□ -2.42
TDP1Q9NUW8 RNA5SP285-201ENST00000516619 119 ntBASIC-0.06□□□□□ -2.42
TDP1Q9NUW8 MIR329-2-201ENST00000385029 84 ntBASIC-0.07□□□□□ -2.42
TDP1Q9NUW8 SNORD78.1-201ENST00000390866 65 ntBASIC-0.07□□□□□ -2.42
TDP1Q9NUW8 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.08□□□□□ -2.42
TDP1Q9NUW8 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.08□□□□□ -2.42
TDP1Q9NUW8 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
TDP1Q9NUW8 MIR1255A-201ENST00000408338 113 ntBASIC-0.08□□□□□ -2.42
TDP1Q9NUW8 SNORA72.7-201ENST00000516349 94 ntBASIC-0.09□□□□□ -2.42
TDP1Q9NUW8 RNU6-46P-201ENST00000383860 107 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 277.2 ms