Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 Y_RNA.43-201ENST00000362670 111 ntBASIC0.1□□□□□ -2.39
VTA1Q9NP79 MIR652-201ENST00000385278 98 ntBASIC0.1□□□□□ -2.39
VTA1Q9NP79 Y_RNA.607-201ENST00000410597 98 ntBASIC0.1□□□□□ -2.39
VTA1Q9NP79 SNORD114-31-201ENST00000363219 75 ntBASIC0.09□□□□□ -2.4
VTA1Q9NP79 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
VTA1Q9NP79 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.09□□□□□ -2.4
VTA1Q9NP79 snoU13.17-201ENST00000458802 104 ntBASIC0.09□□□□□ -2.4
VTA1Q9NP79 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.09□□□□□ -2.4
VTA1Q9NP79 CR383656.4-201ENST00000546909 122 ntBASIC0.09□□□□□ -2.4
VTA1Q9NP79 MIR106A-201ENST00000384870 81 ntBASIC0.08□□□□□ -2.4
VTA1Q9NP79 RNA5SP25-201ENST00000410815 110 ntBASIC0.08□□□□□ -2.4
VTA1Q9NP79 AC104692.1-201ENST00000472406 90 ntBASIC0.08□□□□□ -2.4
VTA1Q9NP79 RNU6-752P-201ENST00000516376 102 ntBASIC0.08□□□□□ -2.4
VTA1Q9NP79 RNU6-180P-201ENST00000516697 61 ntBASIC0.08□□□□□ -2.4
VTA1Q9NP79 RNU7-188P-201ENST00000517063 64 ntBASIC0.08□□□□□ -2.4
VTA1Q9NP79 U6.81-201ENST00000612550 106 ntBASIC0.08□□□□□ -2.4
VTA1Q9NP79 MIR148A-201ENST00000362215 68 ntBASIC0.07□□□□□ -2.4
VTA1Q9NP79 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.07□□□□□ -2.4
VTA1Q9NP79 IGLVI-20-201ENST00000519296 130 ntBASIC0.07□□□□□ -2.4
VTA1Q9NP79 MIR5588-201ENST00000581890 63 ntBASIC0.07□□□□□ -2.4
VTA1Q9NP79 RNU6-302P-201ENST00000365249 107 ntBASIC0.06□□□□□ -2.4
VTA1Q9NP79 MIR145-201ENST00000384967 88 ntBASIC0.06□□□□□ -2.4
VTA1Q9NP79 MIR548H2-201ENST00000408874 88 ntBASIC0.06□□□□□ -2.4
VTA1Q9NP79 RNU6-380P-201ENST00000410207 107 ntBASIC0.06□□□□□ -2.4
VTA1Q9NP79 SNORD42B-201ENST00000458893 67 ntBASIC0.06□□□□□ -2.4
VTA1Q9NP79 RNU7-159P-201ENST00000459284 62 ntBASIC0.06□□□□□ -2.4
VTA1Q9NP79 RNU6-274P-201ENST00000459566 107 ntBASIC0.06□□□□□ -2.4
VTA1Q9NP79 YWHAEP3-201ENST00000582767 121 ntBASIC0.06□□□□□ -2.4
VTA1Q9NP79 MIR1295B-201ENST00000636144 60 ntBASIC0.06□□□□□ -2.4
VTA1Q9NP79 RNU6-1255P-201ENST00000363434 112 ntBASIC0.05□□□□□ -2.4
VTA1Q9NP79 RNU6-242P-201ENST00000384359 107 ntBASIC0.05□□□□□ -2.4
VTA1Q9NP79 RNU7-165P-201ENST00000458864 60 ntBASIC0.05□□□□□ -2.4
VTA1Q9NP79 SNORD114-16-201ENST00000363044 70 ntBASIC0.04□□□□□ -2.4
VTA1Q9NP79 SNORD114-15-201ENST00000364687 72 ntBASIC0.04□□□□□ -2.4
VTA1Q9NP79 RNU6-979P-201ENST00000383896 107 ntBASIC0.04□□□□□ -2.4
VTA1Q9NP79 RNU6-129P-201ENST00000391022 107 ntBASIC0.04□□□□□ -2.4
VTA1Q9NP79 MIR4290-201ENST00000583807 95 ntBASIC0.04□□□□□ -2.4
VTA1Q9NP79 RNU6-824P-201ENST00000363724 104 ntBASIC0.03□□□□□ -2.4
VTA1Q9NP79 RNU6-382P-201ENST00000365181 106 ntBASIC0.03□□□□□ -2.4
VTA1Q9NP79 RNU7-171P-201ENST00000459581 62 ntBASIC0.03□□□□□ -2.4
VTA1Q9NP79 MIR4773-1-201ENST00000637203 78 ntBASIC0.03□□□□□ -2.4
VTA1Q9NP79 RNU6-340P-201ENST00000364005 107 ntBASIC0.02□□□□□ -2.41
VTA1Q9NP79 RNU6-686P-201ENST00000364839 107 ntBASIC0.02□□□□□ -2.41
VTA1Q9NP79 MIR593-201ENST00000384856 100 ntBASIC0.02□□□□□ -2.41
VTA1Q9NP79 RNA5SP163-201ENST00000410304 99 ntBASIC0.02□□□□□ -2.41
VTA1Q9NP79 RNU6-762P-201ENST00000517107 102 ntBASIC0.02□□□□□ -2.41
VTA1Q9NP79 AP001180.6-201ENST00000584918 159 ntBASIC0.02□□□□□ -2.41
VTA1Q9NP79 RNA5SP331-201ENST00000364986 107 ntBASIC0.01□□□□□ -2.41
VTA1Q9NP79 MIR604-201ENST00000384880 94 ntBASIC0.01□□□□□ -2.41
VTA1Q9NP79 RNA5SP67-201ENST00000516422 131 ntBASIC0.01□□□□□ -2.41
VTA1Q9NP79 MIR4493-201ENST00000584016 73 ntBASIC0.01□□□□□ -2.41
VTA1Q9NP79 MIR6514-201ENST00000622549 70 ntBASIC0.01□□□□□ -2.41
VTA1Q9NP79 Y_RNA.12-201ENST00000362393 112 ntBASIC0□□□□□ -2.41
VTA1Q9NP79 Y_RNA.250-201ENST00000364542 110 ntBASIC0□□□□□ -2.41
VTA1Q9NP79 RNU6-46P-201ENST00000383860 107 ntBASIC0□□□□□ -2.41
VTA1Q9NP79 RNU6-175P-201ENST00000516896 107 ntBASIC0□□□□□ -2.41
VTA1Q9NP79 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
VTA1Q9NP79 RN7SL660P-201ENST00000614852 299 ntBASIC0□□□□□ -2.41
VTA1Q9NP79 RNU6-315P-201ENST00000362666 107 ntBASIC-0.01□□□□□ -2.41
VTA1Q9NP79 AL691482.2-201ENST00000457453 84 ntBASIC-0.01□□□□□ -2.41
VTA1Q9NP79 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.01□□□□□ -2.41
VTA1Q9NP79 AC108676.2-201ENST00000605225 163 ntBASIC-0.01□□□□□ -2.41
VTA1Q9NP79 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.02□□□□□ -2.41
VTA1Q9NP79 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.02□□□□□ -2.41
VTA1Q9NP79 RNU6-260P-201ENST00000384092 107 ntBASIC-0.02□□□□□ -2.41
VTA1Q9NP79 AC022137.1-201ENST00000483735 151 ntBASIC-0.02□□□□□ -2.41
VTA1Q9NP79 SNORD114-5-201ENST00000362928 70 ntBASIC-0.03□□□□□ -2.41
VTA1Q9NP79 RNU6-303P-201ENST00000517091 106 ntBASIC-0.03□□□□□ -2.41
VTA1Q9NP79 MIR1297-201ENST00000637311 77 ntBASIC-0.03□□□□□ -2.41
VTA1Q9NP79 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.03□□□□□ -2.41
VTA1Q9NP79 MIR494-201ENST00000349529 81 ntBASIC-0.04□□□□□ -2.42
VTA1Q9NP79 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.04□□□□□ -2.42
VTA1Q9NP79 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
VTA1Q9NP79 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.05□□□□□ -2.42
VTA1Q9NP79 SNORA63.6-201ENST00000364921 119 ntBASIC-0.05□□□□□ -2.42
VTA1Q9NP79 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.05□□□□□ -2.42
VTA1Q9NP79 MIR548E-201ENST00000408287 88 ntBASIC-0.05□□□□□ -2.42
VTA1Q9NP79 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
VTA1Q9NP79 MIR6509-201ENST00000614603 85 ntBASIC-0.05□□□□□ -2.42
VTA1Q9NP79 MIR214-201ENST00000385214 110 ntBASIC-0.06□□□□□ -2.42
VTA1Q9NP79 MIR1302-4-201ENST00000408701 150 ntBASIC-0.06□□□□□ -2.42
VTA1Q9NP79 MIR409-201ENST00000362237 79 ntBASIC-0.07□□□□□ -2.42
VTA1Q9NP79 SNORA2.1-201ENST00000363089 137 ntBASIC-0.07□□□□□ -2.42
VTA1Q9NP79 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.07□□□□□ -2.42
VTA1Q9NP79 RNU6-807P-201ENST00000516805 107 ntBASIC-0.07□□□□□ -2.42
VTA1Q9NP79 MIR101-1-201ENST00000362265 75 ntBASIC-0.08□□□□□ -2.42
VTA1Q9NP79 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.08□□□□□ -2.42
VTA1Q9NP79 MIR4666B-201ENST00000578142 81 ntBASIC-0.08□□□□□ -2.42
VTA1Q9NP79 MIR4645-201ENST00000583158 77 ntBASIC-0.08□□□□□ -2.42
VTA1Q9NP79 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.08□□□□□ -2.42
VTA1Q9NP79 SNORD73B-201ENST00000364394 72 ntBASIC-0.09□□□□□ -2.42
VTA1Q9NP79 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.09□□□□□ -2.42
VTA1Q9NP79 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.09□□□□□ -2.42
VTA1Q9NP79 RNA5SP266-201ENST00000410273 108 ntBASIC-0.09□□□□□ -2.42
VTA1Q9NP79 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.09□□□□□ -2.42
VTA1Q9NP79 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.1□□□□□ -2.43
VTA1Q9NP79 RNU6-478P-201ENST00000363904 110 ntBASIC-0.1□□□□□ -2.43
VTA1Q9NP79 SNORD95.1-201ENST00000364099 68 ntBASIC-0.1□□□□□ -2.43
VTA1Q9NP79 SNORA32.1-201ENST00000364514 115 ntBASIC-0.1□□□□□ -2.43
VTA1Q9NP79 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 196.8 ms