Protein–RNA interactions for Protein: Q9H0W8

SMG9, Protein SMG9, humanhuman

Known RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9Q9H0W8 RNU1-29P-201ENST00000606574 126 ntBASIC1.08□□□□□ -2.24
SMG9Q9H0W8 uc_338.10-201ENST00000621872 182 ntBASIC1.08□□□□□ -2.24
SMG9Q9H0W8 RNU6-1079P-201ENST00000362861 110 ntBASIC1.07□□□□□ -2.24
SMG9Q9H0W8 RNU6-829P-201ENST00000363700 112 ntBASIC1.07□□□□□ -2.24
SMG9Q9H0W8 RNA5SP517-201ENST00000364724 117 ntBASIC1.07□□□□□ -2.24
SMG9Q9H0W8 RNY1P8-201ENST00000383970 114 ntBASIC1.07□□□□□ -2.24
SMG9Q9H0W8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.07□□□□□ -2.24
SMG9Q9H0W8 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
SMG9Q9H0W8 Y_RNA.125-201ENST00000363371 111 ntBASIC1.06□□□□□ -2.24
SMG9Q9H0W8 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
SMG9Q9H0W8 HMGN2P22-201ENST00000427588 175 ntBASIC1.06□□□□□ -2.24
SMG9Q9H0W8 RNU7-174P-201ENST00000516248 59 ntBASIC1.06□□□□□ -2.24
SMG9Q9H0W8 RNU6-122P-201ENST00000516818 107 ntBASIC1.06□□□□□ -2.24
SMG9Q9H0W8 MIR5706-201ENST00000579841 80 ntBASIC1.06□□□□□ -2.24
SMG9Q9H0W8 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
SMG9Q9H0W8 MIR373-201ENST00000362273 69 ntBASIC1.05□□□□□ -2.24
SMG9Q9H0W8 SNORA36.2-201ENST00000384004 127 ntBASIC1.05□□□□□ -2.24
SMG9Q9H0W8 MIR630-201ENST00000384957 97 ntBASIC1.05□□□□□ -2.24
SMG9Q9H0W8 MIR517B-201ENST00000385102 67 ntBASIC1.05□□□□□ -2.24
SMG9Q9H0W8 MIR3973-201ENST00000579824 107 ntBASIC1.05□□□□□ -2.24
SMG9Q9H0W8 PVT1_3.1-201ENST00000620853 95 ntBASIC1.05□□□□□ -2.24
SMG9Q9H0W8 RNU6-698P-201ENST00000363523 107 ntBASIC1.04□□□□□ -2.24
SMG9Q9H0W8 SNORD114-26-201ENST00000363543 72 ntBASIC1.04□□□□□ -2.24
SMG9Q9H0W8 RNU4-38P-201ENST00000364472 129 ntBASIC1.04□□□□□ -2.24
SMG9Q9H0W8 RNU6-34P-201ENST00000364874 107 ntBASIC1.04□□□□□ -2.24
SMG9Q9H0W8 RNU6-614P-201ENST00000384369 107 ntBASIC1.04□□□□□ -2.24
SMG9Q9H0W8 MIR598-201ENST00000384868 97 ntBASIC1.04□□□□□ -2.24
SMG9Q9H0W8 MIR140-201ENST00000385282 100 ntBASIC1.04□□□□□ -2.24
SMG9Q9H0W8 SNORA75.1-201ENST00000391130 148 ntBASIC1.04□□□□□ -2.24
SMG9Q9H0W8 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
SMG9Q9H0W8 U6.59-201ENST00000615686 107 ntBASIC1.04□□□□□ -2.24
SMG9Q9H0W8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SMG9Q9H0W8 AC069271.1-201ENST00000445577 156 ntBASIC1.03□□□□□ -2.24
SMG9Q9H0W8 SNORD60.1-201ENST00000362451 73 ntBASIC1.02□□□□□ -2.25
SMG9Q9H0W8 SNORD113-2-201ENST00000391082 72 ntBASIC1.01□□□□□ -2.25
SMG9Q9H0W8 RNA5SP436-201ENST00000516020 115 ntBASIC1.01□□□□□ -2.25
SMG9Q9H0W8 ACA64.5-201ENST00000516207 127 ntBASIC1.01□□□□□ -2.25
SMG9Q9H0W8 MIR4698-201ENST00000577795 80 ntBASIC1.01□□□□□ -2.25
SMG9Q9H0W8 SNORA25.18-201ENST00000607153 114 ntBASIC1.01□□□□□ -2.25
SMG9Q9H0W8 MIR6779-201ENST00000617283 64 ntBASIC1.01□□□□□ -2.25
SMG9Q9H0W8 U4.4-201ENST00000620626 117 ntBASIC1.01□□□□□ -2.25
SMG9Q9H0W8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
SMG9Q9H0W8 SNORD118-201ENST00000363593 134 ntBASIC1□□□□□ -2.25
SMG9Q9H0W8 Y_RNA.236-201ENST00000364427 111 ntBASIC1□□□□□ -2.25
SMG9Q9H0W8 MIR608-201ENST00000384820 100 ntBASIC1□□□□□ -2.25
SMG9Q9H0W8 AC244090.1-201ENST00000441884 93 ntBASIC1□□□□□ -2.25
SMG9Q9H0W8 MIR3938-201ENST00000582157 103 ntBASIC1□□□□□ -2.25
SMG9Q9H0W8 AC211469.2-201ENST00000605461 205 ntBASIC1□□□□□ -2.25
SMG9Q9H0W8 MIR20A-201ENST00000362279 71 ntBASIC0.99□□□□□ -2.25
SMG9Q9H0W8 MIR516B1-201ENST00000385211 90 ntBASIC0.99□□□□□ -2.25
SMG9Q9H0W8 RNU6-446P-201ENST00000362827 106 ntBASIC0.98□□□□□ -2.25
SMG9Q9H0W8 RNU6-141P-201ENST00000410499 105 ntBASIC0.98□□□□□ -2.25
SMG9Q9H0W8 U6.96-201ENST00000636425 70 ntBASIC0.98□□□□□ -2.25
SMG9Q9H0W8 RNA5SP325-201ENST00000363756 130 ntBASIC0.97□□□□□ -2.25
SMG9Q9H0W8 MIR532-201ENST00000385025 91 ntBASIC0.97□□□□□ -2.25
SMG9Q9H0W8 SNORA40.8-201ENST00000411034 126 ntBASIC0.97□□□□□ -2.25
SMG9Q9H0W8 CYP3A54P-201ENST00000566950 75 ntBASIC0.97□□□□□ -2.25
SMG9Q9H0W8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SMG9Q9H0W8 SNORA2A-201ENST00000383885 135 ntBASIC0.96□□□□□ -2.26
SMG9Q9H0W8 U7.6-201ENST00000610841 64 ntBASIC0.96□□□□□ -2.26
SMG9Q9H0W8 MIR6857-201ENST00000613267 93 ntBASIC0.96□□□□□ -2.26
SMG9Q9H0W8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.95□□□□□ -2.26
SMG9Q9H0W8 AC243829.6-201ENST00000612652 106 ntBASIC0.95□□□□□ -2.26
SMG9Q9H0W8 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
SMG9Q9H0W8 MIR5000-201ENST00000577717 103 ntBASIC0.94□□□□□ -2.26
SMG9Q9H0W8 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
SMG9Q9H0W8 AC090617.8-201ENST00000623339 167 ntBASIC0.94□□□□□ -2.26
SMG9Q9H0W8 Y_RNA.246-201ENST00000364495 108 ntBASIC0.93□□□□□ -2.26
SMG9Q9H0W8 SNORD114-29-201ENST00000364819 70 ntBASIC0.93□□□□□ -2.26
SMG9Q9H0W8 MIR518A1-201ENST00000385068 85 ntBASIC0.93□□□□□ -2.26
SMG9Q9H0W8 RNU6-229P-201ENST00000516614 102 ntBASIC0.93□□□□□ -2.26
SMG9Q9H0W8 CYP3A137P-201ENST00000562436 69 ntBASIC0.93□□□□□ -2.26
SMG9Q9H0W8 RNU6-110P-201ENST00000384508 104 ntBASIC0.92□□□□□ -2.26
SMG9Q9H0W8 SNORD71-201ENST00000411292 86 ntBASIC0.92□□□□□ -2.26
SMG9Q9H0W8 SNORD2-201ENST00000459163 69 ntBASIC0.92□□□□□ -2.26
SMG9Q9H0W8 Y_RNA.423-201ENST00000384057 113 ntBASIC0.91□□□□□ -2.26
SMG9Q9H0W8 AL021921.1-201ENST00000442774 93 ntBASIC0.91□□□□□ -2.26
SMG9Q9H0W8 RNU6-848P-201ENST00000515948 107 ntBASIC0.91□□□□□ -2.26
SMG9Q9H0W8 RNU6-617P-201ENST00000516147 107 ntBASIC0.91□□□□□ -2.26
SMG9Q9H0W8 RNU6-473P-201ENST00000516164 107 ntBASIC0.91□□□□□ -2.26
SMG9Q9H0W8 RNU6-1232P-201ENST00000516299 86 ntBASIC0.91□□□□□ -2.26
SMG9Q9H0W8 RNU6-1049P-201ENST00000516414 107 ntBASIC0.91□□□□□ -2.26
SMG9Q9H0W8 RNU4-54P-201ENST00000516428 129 ntBASIC0.91□□□□□ -2.26
SMG9Q9H0W8 AC243829.3-201ENST00000622177 108 ntBASIC0.91□□□□□ -2.26
SMG9Q9H0W8 Y_RNA.325-201ENST00000365171 122 ntBASIC0.9□□□□□ -2.27
SMG9Q9H0W8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
SMG9Q9H0W8 RNU7-188P-201ENST00000517063 64 ntBASIC0.9□□□□□ -2.27
SMG9Q9H0W8 MIR6755-201ENST00000619993 66 ntBASIC0.9□□□□□ -2.27
SMG9Q9H0W8 RNU6-518P-201ENST00000516056 96 ntBASIC0.89□□□□□ -2.27
SMG9Q9H0W8 MIR4677-201ENST00000584153 80 ntBASIC0.89□□□□□ -2.27
SMG9Q9H0W8 AL590095.2-201ENST00000604136 117 ntBASIC0.89□□□□□ -2.27
SMG9Q9H0W8 SNORA49-201ENST00000386157 136 ntBASIC0.88□□□□□ -2.27
SMG9Q9H0W8 MIR501-201ENST00000390204 84 ntBASIC0.88□□□□□ -2.27
SMG9Q9H0W8 RNU6-1246P-201ENST00000391064 107 ntBASIC0.88□□□□□ -2.27
SMG9Q9H0W8 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.88□□□□□ -2.27
SMG9Q9H0W8 SNORA9.1-201ENST00000362412 131 ntBASIC0.87□□□□□ -2.27
SMG9Q9H0W8 SNORA41B-201ENST00000384785 128 ntBASIC0.87□□□□□ -2.27
SMG9Q9H0W8 RNU6-337P-201ENST00000391243 106 ntBASIC0.87□□□□□ -2.27
SMG9Q9H0W8 MIR1255B2-201ENST00000408618 67 ntBASIC0.87□□□□□ -2.27
SMG9Q9H0W8 AC098934.3-201ENST00000430450 190 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms