Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 U7.4-201ENST00000614961 63 ntBASIC0.47□□□□□ -2.33
TRIM55Q9BYV6 AL109933.3-201ENST00000619095 188 ntBASIC0.47□□□□□ -2.33
TRIM55Q9BYV6 RNU6-1327P-201ENST00000365302 105 ntBASIC0.46□□□□□ -2.34
TRIM55Q9BYV6 MIR501-201ENST00000390204 84 ntBASIC0.46□□□□□ -2.34
TRIM55Q9BYV6 AC073261.1-201ENST00000429409 121 ntBASIC0.46□□□□□ -2.34
TRIM55Q9BYV6 snoU13.13-201ENST00000458842 104 ntBASIC0.46□□□□□ -2.34
TRIM55Q9BYV6 RNU7-24P-201ENST00000458867 62 ntBASIC0.46□□□□□ -2.34
TRIM55Q9BYV6 RNU6-70P-201ENST00000516438 60 ntBASIC0.46□□□□□ -2.34
TRIM55Q9BYV6 AC145423.2-201ENST00000610631 239 ntBASIC0.46□□□□□ -2.34
TRIM55Q9BYV6 uc_338.10-201ENST00000621872 182 ntBASIC0.46□□□□□ -2.34
TRIM55Q9BYV6 MIR1297-201ENST00000637311 77 ntBASIC0.46□□□□□ -2.34
TRIM55Q9BYV6 RNU6-815P-201ENST00000384080 113 ntBASIC0.45□□□□□ -2.34
TRIM55Q9BYV6 MIR516B1-201ENST00000385211 90 ntBASIC0.45□□□□□ -2.34
TRIM55Q9BYV6 MIR1197-201ENST00000408818 88 ntBASIC0.45□□□□□ -2.34
TRIM55Q9BYV6 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
TRIM55Q9BYV6 MIR3675-201ENST00000583661 73 ntBASIC0.45□□□□□ -2.34
TRIM55Q9BYV6 U7.6-201ENST00000610841 64 ntBASIC0.45□□□□□ -2.34
TRIM55Q9BYV6 AC243829.6-201ENST00000612652 106 ntBASIC0.45□□□□□ -2.34
TRIM55Q9BYV6 Y_RNA.68-201ENST00000362881 102 ntBASIC0.44□□□□□ -2.34
TRIM55Q9BYV6 Y_RNA.125-201ENST00000363371 111 ntBASIC0.44□□□□□ -2.34
TRIM55Q9BYV6 RNU6-776P-201ENST00000364403 104 ntBASIC0.44□□□□□ -2.34
TRIM55Q9BYV6 RNU6-1022P-201ENST00000365049 104 ntBASIC0.44□□□□□ -2.34
TRIM55Q9BYV6 RNA5SP128-201ENST00000365305 116 ntBASIC0.44□□□□□ -2.34
TRIM55Q9BYV6 Y_RNA.681-201ENST00000516445 113 ntBASIC0.44□□□□□ -2.34
TRIM55Q9BYV6 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.44□□□□□ -2.34
TRIM55Q9BYV6 SNORA9.1-201ENST00000362412 131 ntBASIC0.43□□□□□ -2.34
TRIM55Q9BYV6 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
TRIM55Q9BYV6 SNORD45.1-201ENST00000363181 77 ntBASIC0.42□□□□□ -2.34
TRIM55Q9BYV6 VTRNA1-3-201ENST00000365645 89 ntBASIC0.42□□□□□ -2.34
TRIM55Q9BYV6 RNU6-260P-201ENST00000384092 107 ntBASIC0.42□□□□□ -2.34
TRIM55Q9BYV6 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
TRIM55Q9BYV6 AC108740.1-201ENST00000498629 225 ntBASIC0.42□□□□□ -2.34
TRIM55Q9BYV6 MIR4677-201ENST00000584153 80 ntBASIC0.42□□□□□ -2.34
TRIM55Q9BYV6 MIR3657-201ENST00000584818 117 ntBASIC0.42□□□□□ -2.34
TRIM55Q9BYV6 RNA5SP257-201ENST00000363023 116 ntBASIC0.41□□□□□ -2.34
TRIM55Q9BYV6 Y_RNA.178-201ENST00000363832 102 ntBASIC0.41□□□□□ -2.34
TRIM55Q9BYV6 MIR582-201ENST00000365731 98 ntBASIC0.41□□□□□ -2.34
TRIM55Q9BYV6 Y_RNA.565-201ENST00000384719 101 ntBASIC0.41□□□□□ -2.34
TRIM55Q9BYV6 SCARNA17.3-201ENST00000516381 125 ntBASIC0.41□□□□□ -2.34
TRIM55Q9BYV6 RNU7-188P-201ENST00000517063 64 ntBASIC0.41□□□□□ -2.34
TRIM55Q9BYV6 AC069113.3-201ENST00000521019 150 ntBASIC0.41□□□□□ -2.34
TRIM55Q9BYV6 MIR4662A-201ENST00000637499 67 ntBASIC0.41□□□□□ -2.34
TRIM55Q9BYV6 SNORD114-4-201ENST00000363962 75 ntBASIC0.4□□□□□ -2.35
TRIM55Q9BYV6 RNU6-604P-201ENST00000390917 100 ntBASIC0.4□□□□□ -2.35
TRIM55Q9BYV6 SNORA62.5-201ENST00000516634 120 ntBASIC0.4□□□□□ -2.35
TRIM55Q9BYV6 SNORA40.17-201ENST00000517256 115 ntBASIC0.4□□□□□ -2.35
TRIM55Q9BYV6 Y_RNA.545-201ENST00000384652 105 ntBASIC0.39□□□□□ -2.35
TRIM55Q9BYV6 MIR643-201ENST00000385267 97 ntBASIC0.39□□□□□ -2.35
TRIM55Q9BYV6 RNU6-752P-201ENST00000516376 102 ntBASIC0.39□□□□□ -2.35
TRIM55Q9BYV6 MIR2909-201ENST00000617113 69 ntBASIC0.39□□□□□ -2.35
TRIM55Q9BYV6 AC084368.1-201ENST00000620935 65 ntBASIC0.39□□□□□ -2.35
TRIM55Q9BYV6 Y_RNA.433-201ENST00000384089 102 ntBASIC0.38□□□□□ -2.35
TRIM55Q9BYV6 RNU6-1241P-201ENST00000384536 107 ntBASIC0.38□□□□□ -2.35
TRIM55Q9BYV6 MIR548E-201ENST00000408287 88 ntBASIC0.38□□□□□ -2.35
TRIM55Q9BYV6 RNA5SP134-201ENST00000516492 96 ntBASIC0.38□□□□□ -2.35
TRIM55Q9BYV6 MIR4514-201ENST00000581410 57 ntBASIC0.38□□□□□ -2.35
TRIM55Q9BYV6 MIR3925-201ENST00000584674 77 ntBASIC0.38□□□□□ -2.35
TRIM55Q9BYV6 MIR548AD-201ENST00000584780 82 ntBASIC0.38□□□□□ -2.35
TRIM55Q9BYV6 RNU6-411P-201ENST00000384451 107 ntBASIC0.37□□□□□ -2.35
TRIM55Q9BYV6 SNORD45A-201ENST00000384512 84 ntBASIC0.37□□□□□ -2.35
TRIM55Q9BYV6 MIR154-201ENST00000385243 84 ntBASIC0.37□□□□□ -2.35
TRIM55Q9BYV6 AC021146.9-201ENST00000512503 156 ntBASIC0.37□□□□□ -2.35
TRIM55Q9BYV6 RNU6-1015P-201ENST00000517121 99 ntBASIC0.37□□□□□ -2.35
TRIM55Q9BYV6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
TRIM55Q9BYV6 RNU6-127P-201ENST00000390897 107 ntBASIC0.36□□□□□ -2.35
TRIM55Q9BYV6 RNU6-587P-201ENST00000391282 106 ntBASIC0.35□□□□□ -2.35
TRIM55Q9BYV6 RNU6-982P-201ENST00000516216 102 ntBASIC0.35□□□□□ -2.35
TRIM55Q9BYV6 SCARNA11.2-201ENST00000517183 154 ntBASIC0.35□□□□□ -2.35
TRIM55Q9BYV6 SNORA2.1-201ENST00000363089 137 ntBASIC0.34□□□□□ -2.36
TRIM55Q9BYV6 SNORD115-31-201ENST00000365318 82 ntBASIC0.34□□□□□ -2.36
TRIM55Q9BYV6 RNU6-523P-201ENST00000516304 54 ntBASIC0.34□□□□□ -2.36
TRIM55Q9BYV6 RNU6-687P-201ENST00000516443 89 ntBASIC0.34□□□□□ -2.36
TRIM55Q9BYV6 RN7SL660P-201ENST00000614852 299 ntBASIC0.34□□□□□ -2.36
TRIM55Q9BYV6 SNORD115-22-201ENST00000364456 82 ntBASIC0.33□□□□□ -2.36
TRIM55Q9BYV6 SNORD114-29-201ENST00000364819 70 ntBASIC0.33□□□□□ -2.36
TRIM55Q9BYV6 MIR4315-1-201ENST00000636800 73 ntBASIC0.33□□□□□ -2.36
TRIM55Q9BYV6 MIR4315-2-201ENST00000640925 73 ntBASIC0.33□□□□□ -2.36
TRIM55Q9BYV6 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.32□□□□□ -2.36
TRIM55Q9BYV6 MIR20A-201ENST00000362279 71 ntBASIC0.32□□□□□ -2.36
TRIM55Q9BYV6 SNORA63.6-201ENST00000364921 119 ntBASIC0.32□□□□□ -2.36
TRIM55Q9BYV6 RNU6-1036P-201ENST00000383959 104 ntBASIC0.32□□□□□ -2.36
TRIM55Q9BYV6 MIR106A-201ENST00000384870 81 ntBASIC0.32□□□□□ -2.36
TRIM55Q9BYV6 RNU6-175P-201ENST00000516896 107 ntBASIC0.32□□□□□ -2.36
TRIM55Q9BYV6 RNU6-1296P-201ENST00000383879 107 ntBASIC0.31□□□□□ -2.36
TRIM55Q9BYV6 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.31□□□□□ -2.36
TRIM55Q9BYV6 AC244090.1-201ENST00000441884 93 ntBASIC0.3□□□□□ -2.36
TRIM55Q9BYV6 RNU6-881P-201ENST00000516813 102 ntBASIC0.3□□□□□ -2.36
TRIM55Q9BYV6 AC023932.2-201ENST00000603176 175 ntBASIC0.3□□□□□ -2.36
TRIM55Q9BYV6 SNORD113.1-201ENST00000363280 73 ntBASIC0.29□□□□□ -2.36
TRIM55Q9BYV6 SNORA33.1-201ENST00000364957 130 ntBASIC0.29□□□□□ -2.36
TRIM55Q9BYV6 RNA5SP63-201ENST00000391225 112 ntBASIC0.29□□□□□ -2.36
TRIM55Q9BYV6 RNU6-645P-201ENST00000364649 106 ntBASIC0.28□□□□□ -2.36
TRIM55Q9BYV6 RNU6-895P-201ENST00000384125 103 ntBASIC0.28□□□□□ -2.36
TRIM55Q9BYV6 RNU6-782P-201ENST00000516852 104 ntBASIC0.28□□□□□ -2.36
TRIM55Q9BYV6 MIR8053-201ENST00000613344 75 ntBASIC0.28□□□□□ -2.36
TRIM55Q9BYV6 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.28□□□□□ -2.36
TRIM55Q9BYV6 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.27□□□□□ -2.37
TRIM55Q9BYV6 MIR593-201ENST00000384856 100 ntBASIC0.26□□□□□ -2.37
TRIM55Q9BYV6 SNORA49-201ENST00000386157 136 ntBASIC0.26□□□□□ -2.37
TRIM55Q9BYV6 SNORA75.1-201ENST00000391130 148 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 221.3 ms