Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNU6-939P-201ENST00000384634 107 ntBASIC1.27□□□□□ -2.21
USB1Q9BQ65 AL354695.1-201ENST00000427935 228 ntBASIC1.27□□□□□ -2.21
USB1Q9BQ65 MIR548AD-201ENST00000584780 82 ntBASIC1.27□□□□□ -2.21
USB1Q9BQ65 AC243829.3-201ENST00000622177 108 ntBASIC1.27□□□□□ -2.21
USB1Q9BQ65 SNORD2-201ENST00000459163 69 ntBASIC1.26□□□□□ -2.21
USB1Q9BQ65 MIR4421-201ENST00000578133 69 ntBASIC1.26□□□□□ -2.21
USB1Q9BQ65 SNORD114-29-201ENST00000364819 70 ntBASIC1.25□□□□□ -2.21
USB1Q9BQ65 MIR140-201ENST00000385282 100 ntBASIC1.25□□□□□ -2.21
USB1Q9BQ65 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.25□□□□□ -2.21
USB1Q9BQ65 RNU6-231P-201ENST00000517122 103 ntBASIC1.25□□□□□ -2.21
USB1Q9BQ65 SNORA25.18-201ENST00000607153 114 ntBASIC1.25□□□□□ -2.21
USB1Q9BQ65 SNORD116-16-201ENST00000384533 92 ntBASIC1.24□□□□□ -2.21
USB1Q9BQ65 MIR519A2-201ENST00000384990 87 ntBASIC1.24□□□□□ -2.21
USB1Q9BQ65 U7.6-201ENST00000610841 64 ntBASIC1.24□□□□□ -2.21
USB1Q9BQ65 SNORA2A-201ENST00000383885 135 ntBASIC1.23□□□□□ -2.21
USB1Q9BQ65 MIR527-201ENST00000385244 85 ntBASIC1.23□□□□□ -2.21
USB1Q9BQ65 ACA64.5-201ENST00000516207 127 ntBASIC1.23□□□□□ -2.21
USB1Q9BQ65 RNA5SP61-201ENST00000516453 100 ntBASIC1.23□□□□□ -2.21
USB1Q9BQ65 MIR4661-201ENST00000582720 75 ntBASIC1.23□□□□□ -2.21
USB1Q9BQ65 RNU6-229P-201ENST00000516614 102 ntBASIC1.22□□□□□ -2.21
USB1Q9BQ65 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.22□□□□□ -2.21
USB1Q9BQ65 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.21□□□□□ -2.22
USB1Q9BQ65 Y_RNA.282-201ENST00000364793 102 ntBASIC1.21□□□□□ -2.22
USB1Q9BQ65 TRMT112P2-201ENST00000512910 132 ntBASIC1.21□□□□□ -2.22
USB1Q9BQ65 AL353770.2-201ENST00000620024 78 ntBASIC1.21□□□□□ -2.22
USB1Q9BQ65 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
USB1Q9BQ65 SNORD118-201ENST00000363593 134 ntBASIC1.2□□□□□ -2.22
USB1Q9BQ65 RNU6-321P-201ENST00000410912 106 ntBASIC1.2□□□□□ -2.22
USB1Q9BQ65 RNU7-188P-201ENST00000517063 64 ntBASIC1.2□□□□□ -2.22
USB1Q9BQ65 RNU6-392P-201ENST00000364926 101 ntBASIC1.19□□□□□ -2.22
USB1Q9BQ65 Y_RNA.327-201ENST00000365201 102 ntBASIC1.19□□□□□ -2.22
USB1Q9BQ65 Y_RNA.379-201ENST00000365653 102 ntBASIC1.19□□□□□ -2.22
USB1Q9BQ65 Y_RNA.423-201ENST00000384057 113 ntBASIC1.19□□□□□ -2.22
USB1Q9BQ65 RNU6-337P-201ENST00000391243 106 ntBASIC1.19□□□□□ -2.22
USB1Q9BQ65 SNORD116.2-201ENST00000391251 93 ntBASIC1.19□□□□□ -2.22
USB1Q9BQ65 SNORA40.8-201ENST00000411034 126 ntBASIC1.19□□□□□ -2.22
USB1Q9BQ65 MIR6773-201ENST00000612812 74 ntBASIC1.19□□□□□ -2.22
USB1Q9BQ65 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.18□□□□□ -2.22
USB1Q9BQ65 Y_RNA.676-201ENST00000516393 96 ntBASIC1.18□□□□□ -2.22
USB1Q9BQ65 MIR6078-201ENST00000611069 100 ntBASIC1.18□□□□□ -2.22
USB1Q9BQ65 Y_RNA.164-201ENST00000363709 102 ntBASIC1.17□□□□□ -2.22
USB1Q9BQ65 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
USB1Q9BQ65 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
USB1Q9BQ65 MIR608-201ENST00000384820 100 ntBASIC1.16□□□□□ -2.22
USB1Q9BQ65 RNU4-88P-201ENST00000411220 86 ntBASIC1.16□□□□□ -2.22
USB1Q9BQ65 SNORD71-201ENST00000411292 86 ntBASIC1.16□□□□□ -2.22
USB1Q9BQ65 RNU6-1232P-201ENST00000516299 86 ntBASIC1.16□□□□□ -2.22
USB1Q9BQ65 MIR3660-201ENST00000584845 100 ntBASIC1.16□□□□□ -2.22
USB1Q9BQ65 MIR7110-201ENST00000612638 86 ntBASIC1.16□□□□□ -2.22
USB1Q9BQ65 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
USB1Q9BQ65 SNORD115-25-201ENST00000362619 82 ntBASIC1.15□□□□□ -2.23
USB1Q9BQ65 SNORA49-201ENST00000386157 136 ntBASIC1.15□□□□□ -2.23
USB1Q9BQ65 RNU7-154P-201ENST00000516194 62 ntBASIC1.15□□□□□ -2.23
USB1Q9BQ65 AC068338.1-201ENST00000565567 176 ntBASIC1.15□□□□□ -2.23
USB1Q9BQ65 RNU6-175P-201ENST00000516896 107 ntBASIC1.14□□□□□ -2.23
USB1Q9BQ65 RNU6-753P-201ENST00000363926 107 ntBASIC1.13□□□□□ -2.23
USB1Q9BQ65 RNA5SP470-201ENST00000516463 106 ntBASIC1.13□□□□□ -2.23
USB1Q9BQ65 MIR4677-201ENST00000584153 80 ntBASIC1.13□□□□□ -2.23
USB1Q9BQ65 RNU6-246P-201ENST00000384702 107 ntBASIC1.12□□□□□ -2.23
USB1Q9BQ65 MIR518A1-201ENST00000385068 85 ntBASIC1.12□□□□□ -2.23
USB1Q9BQ65 RNU4-54P-201ENST00000516428 129 ntBASIC1.12□□□□□ -2.23
USB1Q9BQ65 AC084368.1-201ENST00000620935 65 ntBASIC1.12□□□□□ -2.23
USB1Q9BQ65 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
USB1Q9BQ65 SNORA40.16-201ENST00000517238 121 ntBASIC1.11□□□□□ -2.23
USB1Q9BQ65 MIR548AG1-201ENST00000579932 66 ntBASIC1.11□□□□□ -2.23
USB1Q9BQ65 RNU6-1036P-201ENST00000383959 104 ntBASIC1.1□□□□□ -2.23
USB1Q9BQ65 MIRLET7B-201ENST00000385140 83 ntBASIC1.1□□□□□ -2.23
USB1Q9BQ65 MIR501-201ENST00000390204 84 ntBASIC1.1□□□□□ -2.23
USB1Q9BQ65 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.1□□□□□ -2.23
USB1Q9BQ65 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
USB1Q9BQ65 RNU6-848P-201ENST00000515948 107 ntBASIC1.09□□□□□ -2.23
USB1Q9BQ65 RNU6-617P-201ENST00000516147 107 ntBASIC1.09□□□□□ -2.23
USB1Q9BQ65 RNU6-473P-201ENST00000516164 107 ntBASIC1.09□□□□□ -2.23
USB1Q9BQ65 RNU6-1049P-201ENST00000516414 107 ntBASIC1.09□□□□□ -2.23
USB1Q9BQ65 RNU6-980P-201ENST00000516925 103 ntBASIC1.09□□□□□ -2.23
USB1Q9BQ65 MIR6755-201ENST00000619993 66 ntBASIC1.09□□□□□ -2.23
USB1Q9BQ65 MIR429-201ENST00000362106 83 ntBASIC1.07□□□□□ -2.24
USB1Q9BQ65 RNU6-502P-201ENST00000362419 108 ntBASIC1.07□□□□□ -2.24
USB1Q9BQ65 Y_RNA.109-201ENST00000363215 102 ntBASIC1.07□□□□□ -2.24
USB1Q9BQ65 MIR760-201ENST00000390220 80 ntBASIC1.07□□□□□ -2.24
USB1Q9BQ65 RNU6-782P-201ENST00000516852 104 ntBASIC1.07□□□□□ -2.24
USB1Q9BQ65 SNORD1B-201ENST00000363091 84 ntBASIC1.06□□□□□ -2.24
USB1Q9BQ65 RNU6-110P-201ENST00000384508 104 ntBASIC1.06□□□□□ -2.24
USB1Q9BQ65 SNORA40B-201ENST00000385573 128 ntBASIC1.06□□□□□ -2.24
USB1Q9BQ65 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
USB1Q9BQ65 AL590095.2-201ENST00000604136 117 ntBASIC1.06□□□□□ -2.24
USB1Q9BQ65 RNU6-810P-201ENST00000364001 107 ntBASIC1.05□□□□□ -2.24
USB1Q9BQ65 RNU6-172P-201ENST00000411000 93 ntBASIC1.05□□□□□ -2.24
USB1Q9BQ65 RNU4-33P-201ENST00000364316 85 ntBASIC1.04□□□□□ -2.24
USB1Q9BQ65 MIR499A-201ENST00000384903 122 ntBASIC1.04□□□□□ -2.24
USB1Q9BQ65 AC098934.3-201ENST00000430450 190 ntBASIC1.04□□□□□ -2.24
USB1Q9BQ65 RNU6-458P-201ENST00000384179 107 ntBASIC1.03□□□□□ -2.24
USB1Q9BQ65 RNA5SP247-201ENST00000411181 105 ntBASIC1.03□□□□□ -2.24
USB1Q9BQ65 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
USB1Q9BQ65 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.24
USB1Q9BQ65 U6.58-201ENST00000613107 107 ntBASIC1.03□□□□□ -2.24
USB1Q9BQ65 RN7SL660P-201ENST00000614852 299 ntBASIC1.03□□□□□ -2.24
USB1Q9BQ65 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
USB1Q9BQ65 MIR6504-201ENST00000613520 61 ntBASIC1.02□□□□□ -2.25
USB1Q9BQ65 MIR8070-201ENST00000616510 88 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms