Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
SYNGAP1Q96PV0 AC005520.4-201ENST00000604337 90 ntBASIC1.08□□□□□ -2.24
SYNGAP1Q96PV0 AL353765.1-201ENST00000605514 183 ntBASIC1.08□□□□□ -2.24
SYNGAP1Q96PV0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
SYNGAP1Q96PV0 RNY1P8-201ENST00000383970 114 ntBASIC1.07□□□□□ -2.24
SYNGAP1Q96PV0 SNORD110-201ENST00000408189 75 ntBASIC1.07□□□□□ -2.24
SYNGAP1Q96PV0 MIR4711-201ENST00000578274 70 ntBASIC1.07□□□□□ -2.24
SYNGAP1Q96PV0 AC069503.3-201ENST00000618674 145 ntBASIC1.07□□□□□ -2.24
SYNGAP1Q96PV0 AL162376.1-201ENST00000624117 175 ntBASIC1.07□□□□□ -2.24
SYNGAP1Q96PV0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SYNGAP1Q96PV0 snoU13.13-201ENST00000458842 104 ntBASIC1.06□□□□□ -2.24
SYNGAP1Q96PV0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
SYNGAP1Q96PV0 MIR7107-201ENST00000611489 80 ntBASIC1.06□□□□□ -2.24
SYNGAP1Q96PV0 MIR6828-201ENST00000636181 60 ntBASIC1.06□□□□□ -2.24
SYNGAP1Q96PV0 SNORA25.4-201ENST00000363666 124 ntBASIC1.05□□□□□ -2.24
SYNGAP1Q96PV0 Y_RNA.386-201ENST00000383913 105 ntBASIC1.05□□□□□ -2.24
SYNGAP1Q96PV0 MIR4752-201ENST00000579672 72 ntBASIC1.05□□□□□ -2.24
SYNGAP1Q96PV0 MIR4661-201ENST00000582720 75 ntBASIC1.05□□□□□ -2.24
SYNGAP1Q96PV0 AC073869.9-201ENST00000641610 120 ntBASIC1.05□□□□□ -2.24
SYNGAP1Q96PV0 RNU6-645P-201ENST00000364649 106 ntBASIC1.04□□□□□ -2.24
SYNGAP1Q96PV0 SNORD116-24-201ENST00000384549 92 ntBASIC1.04□□□□□ -2.24
SYNGAP1Q96PV0 MIR548C-201ENST00000384815 97 ntBASIC1.04□□□□□ -2.24
SYNGAP1Q96PV0 MIR4636-201ENST00000582271 80 ntBASIC1.03□□□□□ -2.24
SYNGAP1Q96PV0 SNORA2.1-201ENST00000363089 137 ntBASIC1.02□□□□□ -2.25
SYNGAP1Q96PV0 Y_RNA.407-201ENST00000383986 113 ntBASIC1.02□□□□□ -2.25
SYNGAP1Q96PV0 RNA5SP25-201ENST00000410815 110 ntBASIC1.02□□□□□ -2.25
SYNGAP1Q96PV0 ACA64.5-201ENST00000516207 127 ntBASIC1.01□□□□□ -2.25
SYNGAP1Q96PV0 SNORA25.18-201ENST00000607153 114 ntBASIC1.01□□□□□ -2.25
SYNGAP1Q96PV0 AC092634.7-201ENST00000621022 103 ntBASIC1.01□□□□□ -2.25
SYNGAP1Q96PV0 MIR6759-201ENST00000638110 65 ntBASIC1.01□□□□□ -2.25
SYNGAP1Q96PV0 MIR652-201ENST00000385278 98 ntBASIC1□□□□□ -2.25
SYNGAP1Q96PV0 MIR4698-201ENST00000577795 80 ntBASIC1□□□□□ -2.25
SYNGAP1Q96PV0 RNA5SP517-201ENST00000364724 117 ntBASIC0.99□□□□□ -2.25
SYNGAP1Q96PV0 RNU6-30P-201ENST00000384561 107 ntBASIC0.99□□□□□ -2.25
SYNGAP1Q96PV0 SNORA70.25-201ENST00000612741 95 ntBASIC0.99□□□□□ -2.25
SYNGAP1Q96PV0 RNU6-471P-201ENST00000383944 106 ntBASIC0.98□□□□□ -2.25
SYNGAP1Q96PV0 MIR140-201ENST00000385282 100 ntBASIC0.98□□□□□ -2.25
SYNGAP1Q96PV0 Z95118.1-201ENST00000421372 247 ntBASIC0.98□□□□□ -2.25
SYNGAP1Q96PV0 AC069271.1-201ENST00000445577 156 ntBASIC0.98□□□□□ -2.25
SYNGAP1Q96PV0 AC021146.9-201ENST00000512503 156 ntBASIC0.98□□□□□ -2.25
SYNGAP1Q96PV0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
SYNGAP1Q96PV0 RNU6-1187P-201ENST00000364771 110 ntBASIC0.97□□□□□ -2.25
SYNGAP1Q96PV0 RNU6-1162P-201ENST00000384443 104 ntBASIC0.97□□□□□ -2.25
SYNGAP1Q96PV0 MIR608-201ENST00000384820 100 ntBASIC0.97□□□□□ -2.25
SYNGAP1Q96PV0 MIR9-2-201ENST00000384838 87 ntBASIC0.97□□□□□ -2.25
SYNGAP1Q96PV0 MIR548AE1-201ENST00000583292 70 ntBASIC0.97□□□□□ -2.25
SYNGAP1Q96PV0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SYNGAP1Q96PV0 uc_338.10-201ENST00000621872 182 ntBASIC0.96□□□□□ -2.26
SYNGAP1Q96PV0 SNORA9.1-201ENST00000362412 131 ntBASIC0.95□□□□□ -2.26
SYNGAP1Q96PV0 MIR329-2-201ENST00000385029 84 ntBASIC0.95□□□□□ -2.26
SYNGAP1Q96PV0 SCARNA17.3-201ENST00000516381 125 ntBASIC0.95□□□□□ -2.26
SYNGAP1Q96PV0 SNORD114-15-201ENST00000364687 72 ntBASIC0.94□□□□□ -2.26
SYNGAP1Q96PV0 Y_RNA.423-201ENST00000384057 113 ntBASIC0.94□□□□□ -2.26
SYNGAP1Q96PV0 SNORD71-201ENST00000411292 86 ntBASIC0.94□□□□□ -2.26
SYNGAP1Q96PV0 MIR548V-201ENST00000584165 80 ntBASIC0.94□□□□□ -2.26
SYNGAP1Q96PV0 MIR4653-201ENST00000585107 83 ntBASIC0.94□□□□□ -2.26
SYNGAP1Q96PV0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SYNGAP1Q96PV0 SNORA40.17-201ENST00000517256 115 ntBASIC0.93□□□□□ -2.26
SYNGAP1Q96PV0 MIR5589-201ENST00000579442 60 ntBASIC0.93□□□□□ -2.26
SYNGAP1Q96PV0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.93□□□□□ -2.26
SYNGAP1Q96PV0 SNORD114-2-201ENST00000363953 78 ntBASIC0.92□□□□□ -2.26
SYNGAP1Q96PV0 RNA5SP63-201ENST00000391225 112 ntBASIC0.92□□□□□ -2.26
SYNGAP1Q96PV0 RNU6-656P-201ENST00000516785 107 ntBASIC0.92□□□□□ -2.26
SYNGAP1Q96PV0 RNU6-229P-201ENST00000516614 102 ntBASIC0.91□□□□□ -2.26
SYNGAP1Q96PV0 MIR4511-201ENST00000582784 87 ntBASIC0.91□□□□□ -2.26
SYNGAP1Q96PV0 MIR6739-201ENST00000622461 75 ntBASIC0.91□□□□□ -2.26
SYNGAP1Q96PV0 AC103706.3-201ENST00000636297 85 ntBASIC0.91□□□□□ -2.26
SYNGAP1Q96PV0 SNORA40.8-201ENST00000411034 126 ntBASIC0.9□□□□□ -2.26
SYNGAP1Q96PV0 PSMC1P5-201ENST00000512850 177 ntBASIC0.9□□□□□ -2.26
SYNGAP1Q96PV0 MIR5706-201ENST00000579841 80 ntBASIC0.9□□□□□ -2.26
SYNGAP1Q96PV0 RNA5SP347-201ENST00000362445 119 ntBASIC0.89□□□□□ -2.27
SYNGAP1Q96PV0 Y_RNA.250-201ENST00000364542 110 ntBASIC0.89□□□□□ -2.27
SYNGAP1Q96PV0 SNORA63.6-201ENST00000364921 119 ntBASIC0.89□□□□□ -2.27
SYNGAP1Q96PV0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.89□□□□□ -2.27
SYNGAP1Q96PV0 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
SYNGAP1Q96PV0 MIR409-201ENST00000362237 79 ntBASIC0.89□□□□□ -2.27
SYNGAP1Q96PV0 SNORA2A-201ENST00000383885 135 ntBASIC0.89□□□□□ -2.27
SYNGAP1Q96PV0 MIR521-2-201ENST00000384818 87 ntBASIC0.89□□□□□ -2.27
SYNGAP1Q96PV0 AL157398.1-201ENST00000452981 186 ntBASIC0.89□□□□□ -2.27
SYNGAP1Q96PV0 RNU6-351P-201ENST00000516097 100 ntBASIC0.89□□□□□ -2.27
SYNGAP1Q96PV0 RNU6-542P-201ENST00000516405 103 ntBASIC0.89□□□□□ -2.27
SYNGAP1Q96PV0 RNU4-54P-201ENST00000516428 129 ntBASIC0.89□□□□□ -2.27
SYNGAP1Q96PV0 RNU6-1089P-201ENST00000516473 104 ntBASIC0.89□□□□□ -2.27
SYNGAP1Q96PV0 MIR582-201ENST00000365731 98 ntBASIC0.88□□□□□ -2.27
SYNGAP1Q96PV0 RNA5SP299-201ENST00000391203 116 ntBASIC0.88□□□□□ -2.27
SYNGAP1Q96PV0 HMGN2P22-201ENST00000427588 175 ntBASIC0.88□□□□□ -2.27
SYNGAP1Q96PV0 SNORA33.1-201ENST00000364957 130 ntBASIC0.87□□□□□ -2.27
SYNGAP1Q96PV0 SNORA62.5-201ENST00000516634 120 ntBASIC0.87□□□□□ -2.27
SYNGAP1Q96PV0 AC243829.3-201ENST00000622177 108 ntBASIC0.87□□□□□ -2.27
SYNGAP1Q96PV0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.87□□□□□ -2.27
SYNGAP1Q96PV0 U6.96-201ENST00000636425 70 ntBASIC0.87□□□□□ -2.27
SYNGAP1Q96PV0 SNORD118-201ENST00000363593 134 ntBASIC0.86□□□□□ -2.27
SYNGAP1Q96PV0 SNORA15B-2-201ENST00000384058 135 ntBASIC0.86□□□□□ -2.27
SYNGAP1Q96PV0 SNORA15B-1-201ENST00000384334 135 ntBASIC0.86□□□□□ -2.27
SYNGAP1Q96PV0 MIR6835-201ENST00000621552 64 ntBASIC0.86□□□□□ -2.27
SYNGAP1Q96PV0 Y_RNA.375-201ENST00000365625 101 ntBASIC0.85□□□□□ -2.27
SYNGAP1Q96PV0 RNU6-110P-201ENST00000384508 104 ntBASIC0.85□□□□□ -2.27
SYNGAP1Q96PV0 MIR518A1-201ENST00000385068 85 ntBASIC0.85□□□□□ -2.27
SYNGAP1Q96PV0 MIR516B1-201ENST00000385211 90 ntBASIC0.85□□□□□ -2.27
SYNGAP1Q96PV0 MIR548E-201ENST00000408287 88 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms