Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 MIR604-201ENST00000384880 94 ntBASIC-0.61□□□□□ -2.51
ZNF560Q96MR9 MIR224-201ENST00000384889 81 ntBASIC-0.61□□□□□ -2.51
ZNF560Q96MR9 MIR124-2-201ENST00000385081 109 ntBASIC-0.61□□□□□ -2.51
ZNF560Q96MR9 MIR4796-201ENST00000580742 81 ntBASIC-0.61□□□□□ -2.51
ZNF560Q96MR9 AL353803.5-201ENST00000599815 141 ntBASIC-0.61□□□□□ -2.51
ZNF560Q96MR9 MIR6888-201ENST00000621977 67 ntBASIC-0.61□□□□□ -2.51
ZNF560Q96MR9 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.62□□□□□ -2.51
ZNF560Q96MR9 RNU6-260P-201ENST00000384092 107 ntBASIC-0.62□□□□□ -2.51
ZNF560Q96MR9 RNU6-106P-201ENST00000384405 107 ntBASIC-0.62□□□□□ -2.51
ZNF560Q96MR9 MT-TR-201ENST00000387439 65 ntBASIC-0.62□□□□□ -2.51
ZNF560Q96MR9 SNORA13-201ENST00000458790 133 ntBASIC-0.62□□□□□ -2.51
ZNF560Q96MR9 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.62□□□□□ -2.51
ZNF560Q96MR9 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.62□□□□□ -2.51
ZNF560Q96MR9 YWHAEP3-201ENST00000582767 121 ntBASIC-0.62□□□□□ -2.51
ZNF560Q96MR9 U6.81-201ENST00000612550 106 ntBASIC-0.62□□□□□ -2.51
ZNF560Q96MR9 MIR6509-201ENST00000614603 85 ntBASIC-0.62□□□□□ -2.51
ZNF560Q96MR9 RNU6-208P-201ENST00000362431 107 ntBASIC-0.63□□□□□ -2.51
ZNF560Q96MR9 RNU5F-1-201ENST00000362507 117 ntBASIC-0.63□□□□□ -2.51
ZNF560Q96MR9 RNU6-704P-201ENST00000364162 103 ntBASIC-0.63□□□□□ -2.51
ZNF560Q96MR9 RNU6-431P-201ENST00000383874 107 ntBASIC-0.63□□□□□ -2.51
ZNF560Q96MR9 RNU6-972P-201ENST00000391208 107 ntBASIC-0.63□□□□□ -2.51
ZNF560Q96MR9 MTATP6P29-201ENST00000415057 132 ntBASIC-0.63□□□□□ -2.51
ZNF560Q96MR9 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.63□□□□□ -2.51
ZNF560Q96MR9 MIR3681-201ENST00000580089 72 ntBASIC-0.63□□□□□ -2.51
ZNF560Q96MR9 AL365222.1-201ENST00000614661 98 ntBASIC-0.63□□□□□ -2.51
ZNF560Q96MR9 MIR6129-201ENST00000616087 109 ntBASIC-0.63□□□□□ -2.51
ZNF560Q96MR9 U7.3-201ENST00000616123 62 ntBASIC-0.63□□□□□ -2.51
ZNF560Q96MR9 SNORA2.1-201ENST00000363089 137 ntBASIC-0.64□□□□□ -2.51
ZNF560Q96MR9 RNY4P3-201ENST00000365254 95 ntBASIC-0.64□□□□□ -2.51
ZNF560Q96MR9 MIR1255B2-201ENST00000408618 67 ntBASIC-0.64□□□□□ -2.51
ZNF560Q96MR9 AC006254.2-201ENST00000603259 279 ntBASIC-0.64□□□□□ -2.51
ZNF560Q96MR9 SNORD116-10-201ENST00000363791 102 ntBASIC-0.65□□□□□ -2.51
ZNF560Q96MR9 SNORD64-201ENST00000386683 67 ntBASIC-0.65□□□□□ -2.51
ZNF560Q96MR9 MIR196A1-201ENST00000388006 70 ntBASIC-0.65□□□□□ -2.51
ZNF560Q96MR9 Z95118.1-201ENST00000421372 247 ntBASIC-0.65□□□□□ -2.51
ZNF560Q96MR9 AL445584.3-201ENST00000617173 78 ntBASIC-0.65□□□□□ -2.51
ZNF560Q96MR9 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.66□□□□□ -2.52
ZNF560Q96MR9 SNORD114-17-201ENST00000364699 75 ntBASIC-0.66□□□□□ -2.52
ZNF560Q96MR9 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.66□□□□□ -2.52
ZNF560Q96MR9 RNU6-959P-201ENST00000384671 107 ntBASIC-0.66□□□□□ -2.52
ZNF560Q96MR9 SNORD18.2-201ENST00000459604 70 ntBASIC-0.66□□□□□ -2.52
ZNF560Q96MR9 RNU6-758P-201ENST00000516292 89 ntBASIC-0.66□□□□□ -2.52
ZNF560Q96MR9 RNU6-412P-201ENST00000516434 106 ntBASIC-0.66□□□□□ -2.52
ZNF560Q96MR9 MIR548AG1-201ENST00000579932 66 ntBASIC-0.66□□□□□ -2.52
ZNF560Q96MR9 RNA5SP368-201ENST00000364298 116 ntBASIC-0.67□□□□□ -2.52
ZNF560Q96MR9 SNORD74.6-201ENST00000364796 70 ntBASIC-0.67□□□□□ -2.52
ZNF560Q96MR9 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.67□□□□□ -2.52
ZNF560Q96MR9 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.67□□□□□ -2.52
ZNF560Q96MR9 RNU4-63P-201ENST00000411313 118 ntBASIC-0.67□□□□□ -2.52
ZNF560Q96MR9 AL691482.2-201ENST00000457453 84 ntBASIC-0.67□□□□□ -2.52
ZNF560Q96MR9 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.68□□□□□ -2.52
ZNF560Q96MR9 MIR147A-201ENST00000385079 72 ntBASIC-0.68□□□□□ -2.52
ZNF560Q96MR9 MIR1265-201ENST00000408444 86 ntBASIC-0.68□□□□□ -2.52
ZNF560Q96MR9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.68□□□□□ -2.52
ZNF560Q96MR9 RNU6-274P-201ENST00000459566 107 ntBASIC-0.68□□□□□ -2.52
ZNF560Q96MR9 RNU6-589P-201ENST00000516485 107 ntBASIC-0.68□□□□□ -2.52
ZNF560Q96MR9 CYP3A54P-201ENST00000566950 75 ntBASIC-0.68□□□□□ -2.52
ZNF560Q96MR9 SNORA62.4-201ENST00000365504 151 ntBASIC-0.69□□□□□ -2.52
ZNF560Q96MR9 RNU6-746P-201ENST00000384112 109 ntBASIC-0.69□□□□□ -2.52
ZNF560Q96MR9 MIR1302-5-201ENST00000408164 150 ntBASIC-0.69□□□□□ -2.52
ZNF560Q96MR9 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.69□□□□□ -2.52
ZNF560Q96MR9 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.7□□□□□ -2.52
ZNF560Q96MR9 MIR1236-201ENST00000408340 102 ntBASIC-0.7□□□□□ -2.52
ZNF560Q96MR9 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.7□□□□□ -2.52
ZNF560Q96MR9 AC108676.2-201ENST00000605225 163 ntBASIC-0.7□□□□□ -2.52
ZNF560Q96MR9 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
ZNF560Q96MR9 MIR382-201ENST00000637119 76 ntBASIC-0.7□□□□□ -2.52
ZNF560Q96MR9 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.71□□□□□ -2.52
ZNF560Q96MR9 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.71□□□□□ -2.52
ZNF560Q96MR9 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.71□□□□□ -2.52
ZNF560Q96MR9 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.71□□□□□ -2.52
ZNF560Q96MR9 MIR519A2-201ENST00000384990 87 ntBASIC-0.71□□□□□ -2.52
ZNF560Q96MR9 RNA5SP25-201ENST00000410815 110 ntBASIC-0.71□□□□□ -2.52
ZNF560Q96MR9 MIR450A1-201ENST00000362262 91 ntBASIC-0.72□□□□□ -2.52
ZNF560Q96MR9 RNU6-766P-201ENST00000362478 107 ntBASIC-0.72□□□□□ -2.52
ZNF560Q96MR9 RNU6-340P-201ENST00000364005 107 ntBASIC-0.72□□□□□ -2.52
ZNF560Q96MR9 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.72□□□□□ -2.52
ZNF560Q96MR9 MIR521-2-201ENST00000384818 87 ntBASIC-0.72□□□□□ -2.52
ZNF560Q96MR9 AL035461.1-201ENST00000421490 332 ntBASIC-0.72□□□□□ -2.52
ZNF560Q96MR9 AC008267.6-201ENST00000441664 139 ntBASIC-0.72□□□□□ -2.52
ZNF560Q96MR9 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.72□□□□□ -2.52
ZNF560Q96MR9 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.72□□□□□ -2.52
ZNF560Q96MR9 MIR4499-201ENST00000584834 69 ntBASIC-0.72□□□□□ -2.52
ZNF560Q96MR9 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.72□□□□□ -2.52
ZNF560Q96MR9 MIR6739-201ENST00000622461 75 ntBASIC-0.72□□□□□ -2.52
ZNF560Q96MR9 MIR6086-201ENST00000638065 55 ntBASIC-0.72□□□□□ -2.52
ZNF560Q96MR9 SNORD95.1-201ENST00000364099 68 ntBASIC-0.73□□□□□ -2.53
ZNF560Q96MR9 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.73□□□□□ -2.53
ZNF560Q96MR9 RNU6-81P-201ENST00000365608 104 ntBASIC-0.73□□□□□ -2.53
ZNF560Q96MR9 MT-TQ-201ENST00000387372 72 ntBASIC-0.73□□□□□ -2.53
ZNF560Q96MR9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
ZNF560Q96MR9 MTATP8P2-201ENST00000435212 202 ntBASIC-0.73□□□□□ -2.53
ZNF560Q96MR9 AL450471.1-201ENST00000447509 127 ntBASIC-0.73□□□□□ -2.53
ZNF560Q96MR9 MIR3671-201ENST00000580455 88 ntBASIC-0.73□□□□□ -2.53
ZNF560Q96MR9 uc_338.19-201ENST00000616808 99 ntBASIC-0.73□□□□□ -2.53
ZNF560Q96MR9 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.74□□□□□ -2.53
ZNF560Q96MR9 SNORD115-22-201ENST00000364456 82 ntBASIC-0.74□□□□□ -2.53
ZNF560Q96MR9 SNORD83B-201ENST00000386745 93 ntBASIC-0.74□□□□□ -2.53
ZNF560Q96MR9 SCARNA18B-201ENST00000458806 135 ntBASIC-0.74□□□□□ -2.53
ZNF560Q96MR9 RNU7-134P-201ENST00000458997 64 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 210 ms