Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 SNORD30.1-201ENST00000391309 70 ntBASIC0.71□□□□□ -2.3
ZSWIM3Q96MP5 RNA5SP193-201ENST00000410353 107 ntBASIC0.71□□□□□ -2.3
ZSWIM3Q96MP5 MIR4473-201ENST00000583731 91 ntBASIC0.71□□□□□ -2.3
ZSWIM3Q96MP5 MIR6739-201ENST00000622461 75 ntBASIC0.71□□□□□ -2.3
ZSWIM3Q96MP5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
ZSWIM3Q96MP5 Y_RNA.125-201ENST00000363371 111 ntBASIC0.7□□□□□ -2.3
ZSWIM3Q96MP5 MIR652-201ENST00000385278 98 ntBASIC0.7□□□□□ -2.3
ZSWIM3Q96MP5 SNORD71-201ENST00000411292 86 ntBASIC0.7□□□□□ -2.3
ZSWIM3Q96MP5 AC098934.3-201ENST00000430450 190 ntBASIC0.7□□□□□ -2.3
ZSWIM3Q96MP5 RNU6-1216P-201ENST00000362590 107 ntBASIC0.69□□□□□ -2.3
ZSWIM3Q96MP5 RNU6-895P-201ENST00000384125 103 ntBASIC0.69□□□□□ -2.3
ZSWIM3Q96MP5 MIR6755-201ENST00000619993 66 ntBASIC0.69□□□□□ -2.3
ZSWIM3Q96MP5 RNA5SP499-201ENST00000363982 119 ntBASIC0.68□□□□□ -2.3
ZSWIM3Q96MP5 MIR548E-201ENST00000408287 88 ntBASIC0.68□□□□□ -2.3
ZSWIM3Q96MP5 RNU6-982P-201ENST00000516216 102 ntBASIC0.68□□□□□ -2.3
ZSWIM3Q96MP5 RNU4-54P-201ENST00000516428 129 ntBASIC0.68□□□□□ -2.3
ZSWIM3Q96MP5 Y_RNA.443-201ENST00000384135 111 ntBASIC0.67□□□□□ -2.3
ZSWIM3Q96MP5 Y_RNA.633-201ENST00000459107 95 ntBASIC0.67□□□□□ -2.3
ZSWIM3Q96MP5 RNU6-645P-201ENST00000364649 106 ntBASIC0.66□□□□□ -2.3
ZSWIM3Q96MP5 SNORA2A-201ENST00000383885 135 ntBASIC0.66□□□□□ -2.3
ZSWIM3Q96MP5 RNU6-800P-201ENST00000384473 103 ntBASIC0.66□□□□□ -2.3
ZSWIM3Q96MP5 RNU6-863P-201ENST00000515989 104 ntBASIC0.66□□□□□ -2.3
ZSWIM3Q96MP5 MIR4711-201ENST00000578274 70 ntBASIC0.66□□□□□ -2.3
ZSWIM3Q96MP5 AC005520.4-201ENST00000604337 90 ntBASIC0.66□□□□□ -2.3
ZSWIM3Q96MP5 U7.6-201ENST00000610841 64 ntBASIC0.66□□□□□ -2.3
ZSWIM3Q96MP5 SNORA25.4-201ENST00000363666 124 ntBASIC0.65□□□□□ -2.31
ZSWIM3Q96MP5 SNORA63.6-201ENST00000364921 119 ntBASIC0.65□□□□□ -2.31
ZSWIM3Q96MP5 MIR582-201ENST00000365731 98 ntBASIC0.65□□□□□ -2.31
ZSWIM3Q96MP5 RNU6-656P-201ENST00000516785 107 ntBASIC0.65□□□□□ -2.31
ZSWIM3Q96MP5 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.65□□□□□ -2.31
ZSWIM3Q96MP5 RNU6-945P-201ENST00000383947 107 ntBASIC0.64□□□□□ -2.31
ZSWIM3Q96MP5 MIR501-201ENST00000390204 84 ntBASIC0.64□□□□□ -2.31
ZSWIM3Q96MP5 MIR1265-201ENST00000408444 86 ntBASIC0.64□□□□□ -2.31
ZSWIM3Q96MP5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
ZSWIM3Q96MP5 RNA5SP147-201ENST00000516493 109 ntBASIC0.64□□□□□ -2.31
ZSWIM3Q96MP5 uc_338.10-201ENST00000621872 182 ntBASIC0.64□□□□□ -2.31
ZSWIM3Q96MP5 RNA5SP347-201ENST00000362445 119 ntBASIC0.63□□□□□ -2.31
ZSWIM3Q96MP5 MIR521-2-201ENST00000384818 87 ntBASIC0.63□□□□□ -2.31
ZSWIM3Q96MP5 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
ZSWIM3Q96MP5 MTND4LP1-201ENST00000446263 157 ntBASIC0.63□□□□□ -2.31
ZSWIM3Q96MP5 AC021146.9-201ENST00000512503 156 ntBASIC0.63□□□□□ -2.31
ZSWIM3Q96MP5 SNORD114-23-201ENST00000363536 72 ntBASIC0.62□□□□□ -2.31
ZSWIM3Q96MP5 RNU6-471P-201ENST00000383944 106 ntBASIC0.62□□□□□ -2.31
ZSWIM3Q96MP5 MIR193B-201ENST00000384907 83 ntBASIC0.62□□□□□ -2.31
ZSWIM3Q96MP5 RNU6-630P-201ENST00000391258 106 ntBASIC0.62□□□□□ -2.31
ZSWIM3Q96MP5 AC244090.1-201ENST00000441884 93 ntBASIC0.62□□□□□ -2.31
ZSWIM3Q96MP5 RNU6-1232P-201ENST00000516299 86 ntBASIC0.62□□□□□ -2.31
ZSWIM3Q96MP5 RNU6-229P-201ENST00000516614 102 ntBASIC0.62□□□□□ -2.31
ZSWIM3Q96MP5 MIR4677-201ENST00000584153 80 ntBASIC0.62□□□□□ -2.31
ZSWIM3Q96MP5 Y_RNA.423-201ENST00000384057 113 ntBASIC0.61□□□□□ -2.31
ZSWIM3Q96MP5 MIR1273G-201ENST00000577677 100 ntBASIC0.61□□□□□ -2.31
ZSWIM3Q96MP5 MIR548AD-201ENST00000584780 82 ntBASIC0.61□□□□□ -2.31
ZSWIM3Q96MP5 RNA5SP121-201ENST00000516537 101 ntBASIC0.6□□□□□ -2.31
ZSWIM3Q96MP5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
ZSWIM3Q96MP5 MIR20A-201ENST00000362279 71 ntBASIC0.59□□□□□ -2.31
ZSWIM3Q96MP5 SNORD44.1-201ENST00000363202 61 ntBASIC0.59□□□□□ -2.31
ZSWIM3Q96MP5 RNU6-668P-201ENST00000364180 107 ntBASIC0.59□□□□□ -2.31
ZSWIM3Q96MP5 Y_RNA.375-201ENST00000365625 101 ntBASIC0.59□□□□□ -2.31
ZSWIM3Q96MP5 SNORA15B-2-201ENST00000384058 135 ntBASIC0.59□□□□□ -2.31
ZSWIM3Q96MP5 SNORA15B-1-201ENST00000384334 135 ntBASIC0.59□□□□□ -2.31
ZSWIM3Q96MP5 RNU6-1162P-201ENST00000384443 104 ntBASIC0.59□□□□□ -2.31
ZSWIM3Q96MP5 snoU13.13-201ENST00000458842 104 ntBASIC0.59□□□□□ -2.31
ZSWIM3Q96MP5 AC243829.3-201ENST00000622177 108 ntBASIC0.59□□□□□ -2.31
ZSWIM3Q96MP5 RNA5SP128-201ENST00000365305 116 ntBASIC0.58□□□□□ -2.32
ZSWIM3Q96MP5 MIR760-201ENST00000390220 80 ntBASIC0.58□□□□□ -2.32
ZSWIM3Q96MP5 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.58□□□□□ -2.32
ZSWIM3Q96MP5 AC010487.4-201ENST00000637027 61 ntBASIC0.58□□□□□ -2.32
ZSWIM3Q96MP5 SNORD114-29-201ENST00000364819 70 ntBASIC0.57□□□□□ -2.32
ZSWIM3Q96MP5 SNORA68.3-201ENST00000515906 83 ntBASIC0.57□□□□□ -2.32
ZSWIM3Q96MP5 AL109933.3-201ENST00000619095 188 ntBASIC0.57□□□□□ -2.32
ZSWIM3Q96MP5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
ZSWIM3Q96MP5 MIR876-201ENST00000401147 81 ntBASIC0.56□□□□□ -2.32
ZSWIM3Q96MP5 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
ZSWIM3Q96MP5 MIR4511-201ENST00000582784 87 ntBASIC0.56□□□□□ -2.32
ZSWIM3Q96MP5 RNA5SP215-201ENST00000363440 122 ntBASIC0.55□□□□□ -2.32
ZSWIM3Q96MP5 SNORA33.1-201ENST00000364957 130 ntBASIC0.55□□□□□ -2.32
ZSWIM3Q96MP5 MIR516B1-201ENST00000385211 90 ntBASIC0.55□□□□□ -2.32
ZSWIM3Q96MP5 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
ZSWIM3Q96MP5 RNU6-175P-201ENST00000516896 107 ntBASIC0.55□□□□□ -2.32
ZSWIM3Q96MP5 RNU7-188P-201ENST00000517063 64 ntBASIC0.55□□□□□ -2.32
ZSWIM3Q96MP5 AC103706.3-201ENST00000636297 85 ntBASIC0.55□□□□□ -2.32
ZSWIM3Q96MP5 MIRLET7D-201ENST00000362263 87 ntBASIC0.54□□□□□ -2.32
ZSWIM3Q96MP5 Y_RNA.340-201ENST00000365330 92 ntBASIC0.54□□□□□ -2.32
ZSWIM3Q96MP5 SNORA49-201ENST00000386157 136 ntBASIC0.54□□□□□ -2.32
ZSWIM3Q96MP5 SNORD2-201ENST00000459163 69 ntBASIC0.54□□□□□ -2.32
ZSWIM3Q96MP5 AC125388.1-201ENST00000459631 156 ntBASIC0.54□□□□□ -2.32
ZSWIM3Q96MP5 RNU6-1089P-201ENST00000516473 104 ntBASIC0.54□□□□□ -2.32
ZSWIM3Q96MP5 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
ZSWIM3Q96MP5 RNU6-669P-201ENST00000365575 107 ntBASIC0.52□□□□□ -2.33
ZSWIM3Q96MP5 RNU6-542P-201ENST00000516405 103 ntBASIC0.52□□□□□ -2.33
ZSWIM3Q96MP5 RNA5SP330-201ENST00000517096 96 ntBASIC0.52□□□□□ -2.33
ZSWIM3Q96MP5 MIR103A1-201ENST00000362165 78 ntBASIC0.51□□□□□ -2.33
ZSWIM3Q96MP5 Y_RNA.30-201ENST00000362572 97 ntBASIC0.51□□□□□ -2.33
ZSWIM3Q96MP5 MIR3925-201ENST00000584674 77 ntBASIC0.51□□□□□ -2.33
ZSWIM3Q96MP5 U2.7-201ENST00000619197 100 ntBASIC0.51□□□□□ -2.33
ZSWIM3Q96MP5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.51□□□□□ -2.33
ZSWIM3Q96MP5 MIR924-201ENST00000638017 53 ntBASIC0.5□□□□□ -2.33
ZSWIM3Q96MP5 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
ZSWIM3Q96MP5 Y_RNA.115-201ENST00000363272 98 ntBASIC0.49□□□□□ -2.33
ZSWIM3Q96MP5 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 261.1 ms