Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 Y_RNA.423-201ENST00000384057 113 ntBASIC0.54□□□□□ -2.32
VCPIP1Q96JH7 MIR518A1-201ENST00000385068 85 ntBASIC0.54□□□□□ -2.32
VCPIP1Q96JH7 AC073261.1-201ENST00000429409 121 ntBASIC0.54□□□□□ -2.32
VCPIP1Q96JH7 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
VCPIP1Q96JH7 SNORD114-4-201ENST00000363962 75 ntBASIC0.53□□□□□ -2.32
VCPIP1Q96JH7 RNU6-990P-201ENST00000364385 104 ntBASIC0.53□□□□□ -2.32
VCPIP1Q96JH7 Y_RNA.407-201ENST00000383986 113 ntBASIC0.53□□□□□ -2.32
VCPIP1Q96JH7 RNU6-260P-201ENST00000384092 107 ntBASIC0.53□□□□□ -2.32
VCPIP1Q96JH7 RNU6-604P-201ENST00000390917 100 ntBASIC0.52□□□□□ -2.33
VCPIP1Q96JH7 RNU6-871P-201ENST00000516122 100 ntBASIC0.52□□□□□ -2.33
VCPIP1Q96JH7 MIR548AE1-201ENST00000583292 70 ntBASIC0.52□□□□□ -2.33
VCPIP1Q96JH7 MIR3657-201ENST00000584818 117 ntBASIC0.52□□□□□ -2.33
VCPIP1Q96JH7 RNU1-29P-201ENST00000606574 126 ntBASIC0.52□□□□□ -2.33
VCPIP1Q96JH7 RNA5SP62-201ENST00000363457 110 ntBASIC0.51□□□□□ -2.33
VCPIP1Q96JH7 SNORD115-31-201ENST00000365318 82 ntBASIC0.51□□□□□ -2.33
VCPIP1Q96JH7 SNORA2A-201ENST00000383885 135 ntBASIC0.51□□□□□ -2.33
VCPIP1Q96JH7 SNORD45A-201ENST00000384512 84 ntBASIC0.51□□□□□ -2.33
VCPIP1Q96JH7 MIR652-201ENST00000385278 98 ntBASIC0.51□□□□□ -2.33
VCPIP1Q96JH7 RNU6-634P-201ENST00000459134 106 ntBASIC0.51□□□□□ -2.33
VCPIP1Q96JH7 SNORA68.3-201ENST00000515906 83 ntBASIC0.51□□□□□ -2.33
VCPIP1Q96JH7 RNA5SP147-201ENST00000516493 109 ntBASIC0.51□□□□□ -2.33
VCPIP1Q96JH7 MIR5706-201ENST00000579841 80 ntBASIC0.51□□□□□ -2.33
VCPIP1Q96JH7 SNORD115-22-201ENST00000364456 82 ntBASIC0.5□□□□□ -2.33
VCPIP1Q96JH7 HMGN2P22-201ENST00000427588 175 ntBASIC0.5□□□□□ -2.33
VCPIP1Q96JH7 RNU6-1232P-201ENST00000516299 86 ntBASIC0.5□□□□□ -2.33
VCPIP1Q96JH7 AC243829.6-201ENST00000612652 106 ntBASIC0.5□□□□□ -2.33
VCPIP1Q96JH7 MIR8053-201ENST00000613344 75 ntBASIC0.5□□□□□ -2.33
VCPIP1Q96JH7 uc_338.10-201ENST00000621872 182 ntBASIC0.5□□□□□ -2.33
VCPIP1Q96JH7 RNU6-895P-201ENST00000384125 103 ntBASIC0.49□□□□□ -2.33
VCPIP1Q96JH7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.49□□□□□ -2.33
VCPIP1Q96JH7 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
VCPIP1Q96JH7 SCARNA17.3-201ENST00000516381 125 ntBASIC0.48□□□□□ -2.33
VCPIP1Q96JH7 SNORD113.1-201ENST00000363280 73 ntBASIC0.47□□□□□ -2.33
VCPIP1Q96JH7 VTRNA1-3-201ENST00000365645 89 ntBASIC0.47□□□□□ -2.33
VCPIP1Q96JH7 Y_RNA.433-201ENST00000384089 102 ntBASIC0.47□□□□□ -2.33
VCPIP1Q96JH7 SNORA50A-201ENST00000384225 134 ntBASIC0.47□□□□□ -2.33
VCPIP1Q96JH7 RNU6-540P-201ENST00000384622 101 ntBASIC0.47□□□□□ -2.33
VCPIP1Q96JH7 snoU13.13-201ENST00000458842 104 ntBASIC0.47□□□□□ -2.33
VCPIP1Q96JH7 RNU6-881P-201ENST00000516813 102 ntBASIC0.47□□□□□ -2.33
VCPIP1Q96JH7 SNORA40.17-201ENST00000517256 115 ntBASIC0.47□□□□□ -2.33
VCPIP1Q96JH7 MIR6755-201ENST00000619993 66 ntBASIC0.47□□□□□ -2.33
VCPIP1Q96JH7 SNORA2.1-201ENST00000363089 137 ntBASIC0.46□□□□□ -2.34
VCPIP1Q96JH7 Y_RNA.125-201ENST00000363371 111 ntBASIC0.46□□□□□ -2.34
VCPIP1Q96JH7 SNORD30.1-201ENST00000391309 70 ntBASIC0.46□□□□□ -2.34
VCPIP1Q96JH7 AC114801.3-201ENST00000510231 177 ntBASIC0.46□□□□□ -2.34
VCPIP1Q96JH7 RNU6-982P-201ENST00000516216 102 ntBASIC0.46□□□□□ -2.34
VCPIP1Q96JH7 U7.6-201ENST00000610841 64 ntBASIC0.46□□□□□ -2.34
VCPIP1Q96JH7 SNORD44.1-201ENST00000363202 61 ntBASIC0.45□□□□□ -2.34
VCPIP1Q96JH7 RNU6-649P-201ENST00000384463 107 ntBASIC0.45□□□□□ -2.34
VCPIP1Q96JH7 MIR760-201ENST00000390220 80 ntBASIC0.45□□□□□ -2.34
VCPIP1Q96JH7 MIR2909-201ENST00000617113 69 ntBASIC0.45□□□□□ -2.34
VCPIP1Q96JH7 MIR582-201ENST00000365731 98 ntBASIC0.44□□□□□ -2.34
VCPIP1Q96JH7 MIR516B1-201ENST00000385211 90 ntBASIC0.44□□□□□ -2.34
VCPIP1Q96JH7 RNU6-663P-201ENST00000391105 106 ntBASIC0.44□□□□□ -2.34
VCPIP1Q96JH7 RNU7-129P-201ENST00000516128 62 ntBASIC0.44□□□□□ -2.34
VCPIP1Q96JH7 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.44□□□□□ -2.34
VCPIP1Q96JH7 MIRLET7D-201ENST00000362263 87 ntBASIC0.43□□□□□ -2.34
VCPIP1Q96JH7 RNU6-1216P-201ENST00000362590 107 ntBASIC0.43□□□□□ -2.34
VCPIP1Q96JH7 AC139453.2-201ENST00000487255 133 ntBASIC0.43□□□□□ -2.34
VCPIP1Q96JH7 AC021146.9-201ENST00000512503 156 ntBASIC0.43□□□□□ -2.34
VCPIP1Q96JH7 SNORA62.5-201ENST00000516634 120 ntBASIC0.43□□□□□ -2.34
VCPIP1Q96JH7 MIR4514-201ENST00000581410 57 ntBASIC0.43□□□□□ -2.34
VCPIP1Q96JH7 MIR103A1-201ENST00000362165 78 ntBASIC0.42□□□□□ -2.34
VCPIP1Q96JH7 MIR501-201ENST00000390204 84 ntBASIC0.42□□□□□ -2.34
VCPIP1Q96JH7 MIR548E-201ENST00000408287 88 ntBASIC0.42□□□□□ -2.34
VCPIP1Q96JH7 RNU6-848P-201ENST00000515948 107 ntBASIC0.42□□□□□ -2.34
VCPIP1Q96JH7 RNU6-617P-201ENST00000516147 107 ntBASIC0.42□□□□□ -2.34
VCPIP1Q96JH7 RNU6-473P-201ENST00000516164 107 ntBASIC0.42□□□□□ -2.34
VCPIP1Q96JH7 RNU6-1049P-201ENST00000516414 107 ntBASIC0.42□□□□□ -2.34
VCPIP1Q96JH7 MIR499B-201ENST00000636498 73 ntBASIC0.42□□□□□ -2.34
VCPIP1Q96JH7 RNU6-645P-201ENST00000364649 106 ntBASIC0.41□□□□□ -2.34
VCPIP1Q96JH7 RNA5SP128-201ENST00000365305 116 ntBASIC0.41□□□□□ -2.34
VCPIP1Q96JH7 RNU6-863P-201ENST00000515989 104 ntBASIC0.41□□□□□ -2.34
VCPIP1Q96JH7 MIR4677-201ENST00000584153 80 ntBASIC0.41□□□□□ -2.34
VCPIP1Q96JH7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
VCPIP1Q96JH7 MIR20A-201ENST00000362279 71 ntBASIC0.4□□□□□ -2.35
VCPIP1Q96JH7 Y_RNA.250-201ENST00000364542 110 ntBASIC0.4□□□□□ -2.35
VCPIP1Q96JH7 SNORA63.6-201ENST00000364921 119 ntBASIC0.4□□□□□ -2.35
VCPIP1Q96JH7 RNU6-1162P-201ENST00000384443 104 ntBASIC0.4□□□□□ -2.35
VCPIP1Q96JH7 MTND4LP1-201ENST00000446263 157 ntBASIC0.4□□□□□ -2.35
VCPIP1Q96JH7 RNU6-539P-201ENST00000516665 103 ntBASIC0.4□□□□□ -2.35
VCPIP1Q96JH7 RNU7-188P-201ENST00000517063 64 ntBASIC0.4□□□□□ -2.35
VCPIP1Q96JH7 AC084368.1-201ENST00000620935 65 ntBASIC0.4□□□□□ -2.35
VCPIP1Q96JH7 MIR6739-201ENST00000622461 75 ntBASIC0.4□□□□□ -2.35
VCPIP1Q96JH7 U6.111-201ENST00000636093 83 ntBASIC0.4□□□□□ -2.35
VCPIP1Q96JH7 RNU6-668P-201ENST00000364180 107 ntBASIC0.39□□□□□ -2.35
VCPIP1Q96JH7 SNORD114-29-201ENST00000364819 70 ntBASIC0.39□□□□□ -2.35
VCPIP1Q96JH7 SNORD116-24-201ENST00000384549 92 ntBASIC0.39□□□□□ -2.35
VCPIP1Q96JH7 RNU6-630P-201ENST00000391258 106 ntBASIC0.39□□□□□ -2.35
VCPIP1Q96JH7 AC244090.1-201ENST00000441884 93 ntBASIC0.39□□□□□ -2.35
VCPIP1Q96JH7 RNU6-656P-201ENST00000516785 107 ntBASIC0.39□□□□□ -2.35
VCPIP1Q96JH7 MIR548AD-201ENST00000584780 82 ntBASIC0.39□□□□□ -2.35
VCPIP1Q96JH7 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.39□□□□□ -2.35
VCPIP1Q96JH7 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.37□□□□□ -2.35
VCPIP1Q96JH7 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
VCPIP1Q96JH7 SNORA15B-2-201ENST00000384058 135 ntBASIC0.37□□□□□ -2.35
VCPIP1Q96JH7 SNORA15B-1-201ENST00000384334 135 ntBASIC0.37□□□□□ -2.35
VCPIP1Q96JH7 MIR521-2-201ENST00000384818 87 ntBASIC0.37□□□□□ -2.35
VCPIP1Q96JH7 Y_RNA.633-201ENST00000459107 95 ntBASIC0.37□□□□□ -2.35
VCPIP1Q96JH7 AC023932.2-201ENST00000603176 175 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms