Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RNU4-38P-201ENST00000364472 129 ntBASIC1□□□□□ -2.25
IFT43Q96FT9 MIR548C-201ENST00000384815 97 ntBASIC1□□□□□ -2.25
IFT43Q96FT9 SNORA40.8-201ENST00000411034 126 ntBASIC1□□□□□ -2.25
IFT43Q96FT9 HMGN2P22-201ENST00000427588 175 ntBASIC1□□□□□ -2.25
IFT43Q96FT9 RNU6-940P-201ENST00000363433 104 ntBASIC0.99□□□□□ -2.25
IFT43Q96FT9 MIR582-201ENST00000365731 98 ntBASIC0.99□□□□□ -2.25
IFT43Q96FT9 MIR532-201ENST00000385025 91 ntBASIC0.99□□□□□ -2.25
IFT43Q96FT9 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
IFT43Q96FT9 RNU6-1223P-201ENST00000517124 104 ntBASIC0.99□□□□□ -2.25
IFT43Q96FT9 MIR151B-201ENST00000584249 96 ntBASIC0.99□□□□□ -2.25
IFT43Q96FT9 RNU1-29P-201ENST00000606574 126 ntBASIC0.99□□□□□ -2.25
IFT43Q96FT9 MIR6734-201ENST00000621166 68 ntBASIC0.99□□□□□ -2.25
IFT43Q96FT9 MIR20A-201ENST00000362279 71 ntBASIC0.98□□□□□ -2.25
IFT43Q96FT9 Y_RNA.125-201ENST00000363371 111 ntBASIC0.98□□□□□ -2.25
IFT43Q96FT9 SNORA33.1-201ENST00000364957 130 ntBASIC0.98□□□□□ -2.25
IFT43Q96FT9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.98□□□□□ -2.25
IFT43Q96FT9 AC244090.1-201ENST00000441884 93 ntBASIC0.98□□□□□ -2.25
IFT43Q96FT9 RPS29P1-201ENST00000465274 159 ntBASIC0.98□□□□□ -2.25
IFT43Q96FT9 MIR548V-201ENST00000584165 80 ntBASIC0.98□□□□□ -2.25
IFT43Q96FT9 AC022709.1-201ENST00000615967 87 ntBASIC0.98□□□□□ -2.25
IFT43Q96FT9 RNA5SP192-201ENST00000364404 120 ntBASIC0.97□□□□□ -2.25
IFT43Q96FT9 SNORA2A-201ENST00000383885 135 ntBASIC0.97□□□□□ -2.25
IFT43Q96FT9 MTND4LP19-201ENST00000403051 166 ntBASIC0.97□□□□□ -2.25
IFT43Q96FT9 SNORD71-201ENST00000411292 86 ntBASIC0.97□□□□□ -2.25
IFT43Q96FT9 MIR517B-201ENST00000385102 67 ntBASIC0.96□□□□□ -2.26
IFT43Q96FT9 MIR548J-201ENST00000408833 112 ntBASIC0.96□□□□□ -2.26
IFT43Q96FT9 PSMC1P5-201ENST00000512850 177 ntBASIC0.96□□□□□ -2.26
IFT43Q96FT9 AL590095.2-201ENST00000604136 117 ntBASIC0.96□□□□□ -2.26
IFT43Q96FT9 U2.7-201ENST00000619197 100 ntBASIC0.96□□□□□ -2.26
IFT43Q96FT9 MIR373-201ENST00000362273 69 ntBASIC0.95□□□□□ -2.26
IFT43Q96FT9 MIR518A1-201ENST00000385068 85 ntBASIC0.95□□□□□ -2.26
IFT43Q96FT9 RNU6-848P-201ENST00000515948 107 ntBASIC0.95□□□□□ -2.26
IFT43Q96FT9 RNU6-617P-201ENST00000516147 107 ntBASIC0.95□□□□□ -2.26
IFT43Q96FT9 RNU6-473P-201ENST00000516164 107 ntBASIC0.95□□□□□ -2.26
IFT43Q96FT9 RNU6-1049P-201ENST00000516414 107 ntBASIC0.95□□□□□ -2.26
IFT43Q96FT9 RNU6-229P-201ENST00000516614 102 ntBASIC0.95□□□□□ -2.26
IFT43Q96FT9 RNU6-92P-201ENST00000605893 104 ntBASIC0.95□□□□□ -2.26
IFT43Q96FT9 SNORD2-201ENST00000459163 69 ntBASIC0.94□□□□□ -2.26
IFT43Q96FT9 MIR466-201ENST00000580653 84 ntBASIC0.94□□□□□ -2.26
IFT43Q96FT9 RNU6-698P-201ENST00000363523 107 ntBASIC0.93□□□□□ -2.26
IFT43Q96FT9 RNU6-34P-201ENST00000364874 107 ntBASIC0.93□□□□□ -2.26
IFT43Q96FT9 SNORD113-2-201ENST00000391082 72 ntBASIC0.93□□□□□ -2.26
IFT43Q96FT9 RNU7-174P-201ENST00000516248 59 ntBASIC0.93□□□□□ -2.26
IFT43Q96FT9 U6.96-201ENST00000636425 70 ntBASIC0.93□□□□□ -2.26
IFT43Q96FT9 SNORD114-29-201ENST00000364819 70 ntBASIC0.92□□□□□ -2.26
IFT43Q96FT9 MIR633-201ENST00000384821 98 ntBASIC0.92□□□□□ -2.26
IFT43Q96FT9 MIR630-201ENST00000384957 97 ntBASIC0.92□□□□□ -2.26
IFT43Q96FT9 MIR516B1-201ENST00000385211 90 ntBASIC0.92□□□□□ -2.26
IFT43Q96FT9 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
IFT43Q96FT9 RNU4-54P-201ENST00000516428 129 ntBASIC0.91□□□□□ -2.26
IFT43Q96FT9 AC243829.6-201ENST00000612652 106 ntBASIC0.91□□□□□ -2.26
IFT43Q96FT9 Y_RNA.423-201ENST00000384057 113 ntBASIC0.9□□□□□ -2.27
IFT43Q96FT9 AC079150.2-201ENST00000443733 78 ntBASIC0.9□□□□□ -2.27
IFT43Q96FT9 RNU6-122P-201ENST00000516818 107 ntBASIC0.9□□□□□ -2.27
IFT43Q96FT9 CYP3A54P-201ENST00000566950 75 ntBASIC0.9□□□□□ -2.27
IFT43Q96FT9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.89□□□□□ -2.27
IFT43Q96FT9 AC098934.3-201ENST00000430450 190 ntBASIC0.89□□□□□ -2.27
IFT43Q96FT9 CYP3A137P-201ENST00000562436 69 ntBASIC0.89□□□□□ -2.27
IFT43Q96FT9 MIR3973-201ENST00000579824 107 ntBASIC0.89□□□□□ -2.27
IFT43Q96FT9 MIR6515-201ENST00000619843 57 ntBASIC0.89□□□□□ -2.27
IFT43Q96FT9 Y_RNA.540-201ENST00000384638 111 ntBASIC0.88□□□□□ -2.27
IFT43Q96FT9 MIR146A-201ENST00000385201 99 ntBASIC0.88□□□□□ -2.27
IFT43Q96FT9 MIR5000-201ENST00000577717 103 ntBASIC0.88□□□□□ -2.27
IFT43Q96FT9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
IFT43Q96FT9 RNU6-987P-201ENST00000384759 104 ntBASIC0.87□□□□□ -2.27
IFT43Q96FT9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.87□□□□□ -2.27
IFT43Q96FT9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
IFT43Q96FT9 RNU4-37P-201ENST00000410214 84 ntBASIC0.86□□□□□ -2.27
IFT43Q96FT9 RNU6-1232P-201ENST00000516299 86 ntBASIC0.86□□□□□ -2.27
IFT43Q96FT9 MIR4698-201ENST00000577795 80 ntBASIC0.86□□□□□ -2.27
IFT43Q96FT9 SNORD60.1-201ENST00000362451 73 ntBASIC0.85□□□□□ -2.27
IFT43Q96FT9 RNU6-1079P-201ENST00000362861 110 ntBASIC0.85□□□□□ -2.27
IFT43Q96FT9 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
IFT43Q96FT9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.85□□□□□ -2.27
IFT43Q96FT9 RNU6-863P-201ENST00000515989 104 ntBASIC0.85□□□□□ -2.27
IFT43Q96FT9 RNU7-188P-201ENST00000517063 64 ntBASIC0.85□□□□□ -2.27
IFT43Q96FT9 MIR3938-201ENST00000582157 103 ntBASIC0.85□□□□□ -2.27
IFT43Q96FT9 MIR4677-201ENST00000584153 80 ntBASIC0.85□□□□□ -2.27
IFT43Q96FT9 MIR6755-201ENST00000619993 66 ntBASIC0.85□□□□□ -2.27
IFT43Q96FT9 AL021921.1-201ENST00000442774 93 ntBASIC0.84□□□□□ -2.27
IFT43Q96FT9 MIR4653-201ENST00000585107 83 ntBASIC0.84□□□□□ -2.27
IFT43Q96FT9 U4.4-201ENST00000620626 117 ntBASIC0.84□□□□□ -2.27
IFT43Q96FT9 Y_RNA.246-201ENST00000364495 108 ntBASIC0.83□□□□□ -2.28
IFT43Q96FT9 RNU6-614P-201ENST00000384369 107 ntBASIC0.83□□□□□ -2.28
IFT43Q96FT9 MIR598-201ENST00000384868 97 ntBASIC0.83□□□□□ -2.28
IFT43Q96FT9 SNORA75.1-201ENST00000391130 148 ntBASIC0.83□□□□□ -2.28
IFT43Q96FT9 U6.59-201ENST00000615686 107 ntBASIC0.83□□□□□ -2.28
IFT43Q96FT9 MIR501-201ENST00000390204 84 ntBASIC0.82□□□□□ -2.28
IFT43Q96FT9 MIR760-201ENST00000390220 80 ntBASIC0.82□□□□□ -2.28
IFT43Q96FT9 MIR548AD-201ENST00000584780 82 ntBASIC0.82□□□□□ -2.28
IFT43Q96FT9 AC084368.1-201ENST00000620935 65 ntBASIC0.82□□□□□ -2.28
IFT43Q96FT9 RNU6-829P-201ENST00000363700 112 ntBASIC0.81□□□□□ -2.28
IFT43Q96FT9 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
IFT43Q96FT9 AC243829.3-201ENST00000622177 108 ntBASIC0.81□□□□□ -2.28
IFT43Q96FT9 RNA5SP128-201ENST00000365305 116 ntBASIC0.8□□□□□ -2.28
IFT43Q96FT9 RNU6-945P-201ENST00000383947 107 ntBASIC0.8□□□□□ -2.28
IFT43Q96FT9 PVT1_3.1-201ENST00000620853 95 ntBASIC0.8□□□□□ -2.28
IFT43Q96FT9 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
IFT43Q96FT9 RNU6-175P-201ENST00000516896 107 ntBASIC0.79□□□□□ -2.28
IFT43Q96FT9 AC090617.8-201ENST00000623339 167 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 199.5 ms