Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 RNU6-313P-201ENST00000516317 112 ntBASIC-0.54□□□□□ -2.5
SNRNP40Q96DI7 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.54□□□□□ -2.5
SNRNP40Q96DI7 MIR548AX-201ENST00000580117 73 ntBASIC-0.54□□□□□ -2.5
SNRNP40Q96DI7 AC093726.3-201ENST00000637588 150 ntBASIC-0.54□□□□□ -2.5
SNRNP40Q96DI7 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.55□□□□□ -2.5
SNRNP40Q96DI7 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.55□□□□□ -2.5
SNRNP40Q96DI7 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
SNRNP40Q96DI7 SNORD75.1-201ENST00000408373 60 ntBASIC-0.55□□□□□ -2.5
SNRNP40Q96DI7 SNORD38.3-201ENST00000516599 73 ntBASIC-0.55□□□□□ -2.5
SNRNP40Q96DI7 RNU5F-1-201ENST00000362507 117 ntBASIC-0.56□□□□□ -2.5
SNRNP40Q96DI7 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.56□□□□□ -2.5
SNRNP40Q96DI7 MIR204-201ENST00000385200 110 ntBASIC-0.56□□□□□ -2.5
SNRNP40Q96DI7 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.56□□□□□ -2.5
SNRNP40Q96DI7 snoU13.17-201ENST00000458802 104 ntBASIC-0.56□□□□□ -2.5
SNRNP40Q96DI7 U7.3-201ENST00000616123 62 ntBASIC-0.56□□□□□ -2.5
SNRNP40Q96DI7 MIR4773-1-201ENST00000637203 78 ntBASIC-0.56□□□□□ -2.5
SNRNP40Q96DI7 RNU6-973P-201ENST00000364690 107 ntBASIC-0.57□□□□□ -2.5
SNRNP40Q96DI7 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.57□□□□□ -2.5
SNRNP40Q96DI7 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.57□□□□□ -2.5
SNRNP40Q96DI7 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.57□□□□□ -2.5
SNRNP40Q96DI7 MIR203A-201ENST00000384836 110 ntBASIC-0.57□□□□□ -2.5
SNRNP40Q96DI7 RNU2-51P-201ENST00000410708 197 ntBASIC-0.57□□□□□ -2.5
SNRNP40Q96DI7 MIR4280-201ENST00000582178 76 ntBASIC-0.57□□□□□ -2.5
SNRNP40Q96DI7 MIR5704-201ENST00000584029 77 ntBASIC-0.57□□□□□ -2.5
SNRNP40Q96DI7 AC006254.2-201ENST00000603259 279 ntBASIC-0.57□□□□□ -2.5
SNRNP40Q96DI7 RNU6-382P-201ENST00000365181 106 ntBASIC-0.58□□□□□ -2.5
SNRNP40Q96DI7 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.59□□□□□ -2.5
SNRNP40Q96DI7 MIR1236-201ENST00000408340 102 ntBASIC-0.59□□□□□ -2.5
SNRNP40Q96DI7 RNU7-153P-201ENST00000516455 62 ntBASIC-0.59□□□□□ -2.5
SNRNP40Q96DI7 RNA5SP147-201ENST00000516493 109 ntBASIC-0.59□□□□□ -2.5
SNRNP40Q96DI7 MIR4796-201ENST00000580742 81 ntBASIC-0.59□□□□□ -2.5
SNRNP40Q96DI7 MIR6773-201ENST00000612812 74 ntBASIC-0.59□□□□□ -2.5
SNRNP40Q96DI7 MIR6851-201ENST00000617060 67 ntBASIC-0.59□□□□□ -2.5
SNRNP40Q96DI7 RNU6-824P-201ENST00000363724 104 ntBASIC-0.6□□□□□ -2.51
SNRNP40Q96DI7 SNORA3B-201ENST00000391305 131 ntBASIC-0.6□□□□□ -2.51
SNRNP40Q96DI7 MTATP8P2-201ENST00000435212 202 ntBASIC-0.6□□□□□ -2.51
SNRNP40Q96DI7 AC021146.9-201ENST00000512503 156 ntBASIC-0.6□□□□□ -2.51
SNRNP40Q96DI7 snoR1.1-201ENST00000628177 80 ntBASIC-0.6□□□□□ -2.51
SNRNP40Q96DI7 SNORD114-14-201ENST00000362723 75 ntBASIC-0.61□□□□□ -2.51
SNRNP40Q96DI7 MIRLET7B-201ENST00000385140 83 ntBASIC-0.61□□□□□ -2.51
SNRNP40Q96DI7 AL603908.1-201ENST00000406098 201 ntBASIC-0.61□□□□□ -2.51
SNRNP40Q96DI7 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.61□□□□□ -2.51
SNRNP40Q96DI7 U6.81-201ENST00000612550 106 ntBASIC-0.61□□□□□ -2.51
SNRNP40Q96DI7 MIR450A1-201ENST00000362262 91 ntBASIC-0.62□□□□□ -2.51
SNRNP40Q96DI7 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.62□□□□□ -2.51
SNRNP40Q96DI7 RNY4P18-201ENST00000391107 89 ntBASIC-0.62□□□□□ -2.51
SNRNP40Q96DI7 RNU6-337P-201ENST00000391243 106 ntBASIC-0.62□□□□□ -2.51
SNRNP40Q96DI7 RNA5SP266-201ENST00000410273 108 ntBASIC-0.62□□□□□ -2.51
SNRNP40Q96DI7 AL031737.1-201ENST00000450125 223 ntBASIC-0.62□□□□□ -2.51
SNRNP40Q96DI7 MIR8068-201ENST00000618032 68 ntBASIC-0.62□□□□□ -2.51
SNRNP40Q96DI7 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.62□□□□□ -2.51
SNRNP40Q96DI7 U6.96-201ENST00000636425 70 ntBASIC-0.62□□□□□ -2.51
SNRNP40Q96DI7 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.63□□□□□ -2.51
SNRNP40Q96DI7 RNU4-63P-201ENST00000411313 118 ntBASIC-0.63□□□□□ -2.51
SNRNP40Q96DI7 RNU6-592P-201ENST00000411333 103 ntBASIC-0.63□□□□□ -2.51
SNRNP40Q96DI7 MIR6509-201ENST00000614603 85 ntBASIC-0.63□□□□□ -2.51
SNRNP40Q96DI7 MIR2052-201ENST00000636055 55 ntBASIC-0.63□□□□□ -2.51
SNRNP40Q96DI7 SNORD115-23-201ENST00000364461 82 ntBASIC-0.64□□□□□ -2.51
SNRNP40Q96DI7 RNU6-260P-201ENST00000384092 107 ntBASIC-0.64□□□□□ -2.51
SNRNP40Q96DI7 SNORA13-201ENST00000458790 133 ntBASIC-0.64□□□□□ -2.51
SNRNP40Q96DI7 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.64□□□□□ -2.51
SNRNP40Q96DI7 RNU6-755P-201ENST00000364400 103 ntBASIC-0.65□□□□□ -2.51
SNRNP40Q96DI7 MT-TQ-201ENST00000387372 72 ntBASIC-0.65□□□□□ -2.51
SNRNP40Q96DI7 AL691482.2-201ENST00000457453 84 ntBASIC-0.65□□□□□ -2.51
SNRNP40Q96DI7 SNORD115-27-201ENST00000364430 82 ntBASIC-0.66□□□□□ -2.52
SNRNP40Q96DI7 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.66□□□□□ -2.52
SNRNP40Q96DI7 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.66□□□□□ -2.52
SNRNP40Q96DI7 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.66□□□□□ -2.52
SNRNP40Q96DI7 MIR3681-201ENST00000580089 72 ntBASIC-0.66□□□□□ -2.52
SNRNP40Q96DI7 MIR6854-201ENST00000614935 69 ntBASIC-0.66□□□□□ -2.52
SNRNP40Q96DI7 AC090617.8-201ENST00000623339 167 ntBASIC-0.66□□□□□ -2.52
SNRNP40Q96DI7 SNORA2.1-201ENST00000363089 137 ntBASIC-0.67□□□□□ -2.52
SNRNP40Q96DI7 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.67□□□□□ -2.52
SNRNP40Q96DI7 MIR519C-201ENST00000385053 87 ntBASIC-0.68□□□□□ -2.52
SNRNP40Q96DI7 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
SNRNP40Q96DI7 AL606753.1-201ENST00000427435 87 ntBASIC-0.68□□□□□ -2.52
SNRNP40Q96DI7 RNU6-274P-201ENST00000459566 107 ntBASIC-0.68□□□□□ -2.52
SNRNP40Q96DI7 AC021146.6-201ENST00000514659 117 ntBASIC-0.68□□□□□ -2.52
SNRNP40Q96DI7 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.69□□□□□ -2.52
SNRNP40Q96DI7 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.69□□□□□ -2.52
SNRNP40Q96DI7 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.69□□□□□ -2.52
SNRNP40Q96DI7 MIR518B-201ENST00000385127 83 ntBASIC-0.69□□□□□ -2.52
SNRNP40Q96DI7 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
SNRNP40Q96DI7 AL450471.1-201ENST00000447509 127 ntBASIC-0.69□□□□□ -2.52
SNRNP40Q96DI7 SNORD22.1-201ENST00000516331 125 ntBASIC-0.69□□□□□ -2.52
SNRNP40Q96DI7 MIR3657-201ENST00000584818 117 ntBASIC-0.69□□□□□ -2.52
SNRNP40Q96DI7 AP001318.4-201ENST00000616637 121 ntBASIC-0.69□□□□□ -2.52
SNRNP40Q96DI7 RNU6-721P-201ENST00000410155 105 ntBASIC-0.7□□□□□ -2.52
SNRNP40Q96DI7 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.7□□□□□ -2.52
SNRNP40Q96DI7 MIR3179-1-201ENST00000578940 84 ntBASIC-0.7□□□□□ -2.52
SNRNP40Q96DI7 MIR3179-2-201ENST00000579107 84 ntBASIC-0.7□□□□□ -2.52
SNRNP40Q96DI7 MIR3179-3-201ENST00000579566 84 ntBASIC-0.7□□□□□ -2.52
SNRNP40Q96DI7 YWHAEP3-201ENST00000582767 121 ntBASIC-0.7□□□□□ -2.52
SNRNP40Q96DI7 MIR3179-4-201ENST00000617599 84 ntBASIC-0.7□□□□□ -2.52
SNRNP40Q96DI7 RNU6-633P-201ENST00000362612 103 ntBASIC-0.71□□□□□ -2.52
SNRNP40Q96DI7 SNORA33.1-201ENST00000364957 130 ntBASIC-0.71□□□□□ -2.52
SNRNP40Q96DI7 RNU6-905P-201ENST00000384434 107 ntBASIC-0.71□□□□□ -2.52
SNRNP40Q96DI7 MIR196A1-201ENST00000388006 70 ntBASIC-0.71□□□□□ -2.52
SNRNP40Q96DI7 RNU6-752P-201ENST00000516376 102 ntBASIC-0.71□□□□□ -2.52
SNRNP40Q96DI7 AL500527.2-201ENST00000454105 95 ntBASIC-0.72□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 264.6 ms