Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AL353765.1-201ENST00000605514 183 ntBASIC1.39□□□□□ -2.19
HLA-CQ95604 MIR548C-201ENST00000384815 97 ntBASIC1.38□□□□□ -2.19
HLA-CQ95604 RNU6-955P-201ENST00000410497 104 ntBASIC1.38□□□□□ -2.19
HLA-CQ95604 snoU13.13-201ENST00000458842 104 ntBASIC1.38□□□□□ -2.19
HLA-CQ95604 RNA5SP436-201ENST00000516020 115 ntBASIC1.38□□□□□ -2.19
HLA-CQ95604 RN7SL793P-201ENST00000583259 296 ntBASIC1.38□□□□□ -2.19
HLA-CQ95604 MIR6767-201ENST00000637302 66 ntBASIC1.38□□□□□ -2.19
HLA-CQ95604 Y_RNA.30-201ENST00000362572 97 ntBASIC1.37□□□□□ -2.19
HLA-CQ95604 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.37□□□□□ -2.19
HLA-CQ95604 MIR548E-201ENST00000408287 88 ntBASIC1.37□□□□□ -2.19
HLA-CQ95604 Y_RNA.178-201ENST00000363832 102 ntBASIC1.36□□□□□ -2.19
HLA-CQ95604 SNORA33.1-201ENST00000364957 130 ntBASIC1.36□□□□□ -2.19
HLA-CQ95604 MIR4661-201ENST00000582720 75 ntBASIC1.36□□□□□ -2.19
HLA-CQ95604 MIR548AE1-201ENST00000583292 70 ntBASIC1.36□□□□□ -2.19
HLA-CQ95604 MIR4473-201ENST00000583731 91 ntBASIC1.36□□□□□ -2.19
HLA-CQ95604 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
HLA-CQ95604 AC244090.1-201ENST00000441884 93 ntBASIC1.35□□□□□ -2.19
HLA-CQ95604 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
HLA-CQ95604 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
HLA-CQ95604 MIR630-201ENST00000384957 97 ntBASIC1.34□□□□□ -2.19
HLA-CQ95604 U7.6-201ENST00000610841 64 ntBASIC1.34□□□□□ -2.19
HLA-CQ95604 MIR20A-201ENST00000362279 71 ntBASIC1.33□□□□□ -2.2
HLA-CQ95604 MIR216A-201ENST00000385063 110 ntBASIC1.33□□□□□ -2.2
HLA-CQ95604 RNA5SP222-201ENST00000411039 105 ntBASIC1.33□□□□□ -2.2
HLA-CQ95604 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.33□□□□□ -2.2
HLA-CQ95604 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
HLA-CQ95604 MIR582-201ENST00000365731 98 ntBASIC1.32□□□□□ -2.2
HLA-CQ95604 AC087343.1-201ENST00000477341 475 ntBASIC1.32□□□□□ -2.2
HLA-CQ95604 MIR4295-201ENST00000585286 85 ntBASIC1.32□□□□□ -2.2
HLA-CQ95604 RNU6-446P-201ENST00000362827 106 ntBASIC1.3□□□□□ -2.2
HLA-CQ95604 AL021921.1-201ENST00000442774 93 ntBASIC1.3□□□□□ -2.2
HLA-CQ95604 RNU6-848P-201ENST00000515948 107 ntBASIC1.3□□□□□ -2.2
HLA-CQ95604 RNU6-617P-201ENST00000516147 107 ntBASIC1.3□□□□□ -2.2
HLA-CQ95604 RNU6-473P-201ENST00000516164 107 ntBASIC1.3□□□□□ -2.2
HLA-CQ95604 RNU6-1049P-201ENST00000516414 107 ntBASIC1.3□□□□□ -2.2
HLA-CQ95604 MIR5000-201ENST00000577717 103 ntBASIC1.3□□□□□ -2.2
HLA-CQ95604 SNORA70.25-201ENST00000612741 95 ntBASIC1.3□□□□□ -2.2
HLA-CQ95604 U4.4-201ENST00000620626 117 ntBASIC1.3□□□□□ -2.2
HLA-CQ95604 RNU6-520P-201ENST00000384717 104 ntBASIC1.29□□□□□ -2.2
HLA-CQ95604 SNORA75.1-201ENST00000391130 148 ntBASIC1.29□□□□□ -2.2
HLA-CQ95604 RNU6-939P-201ENST00000384634 107 ntBASIC1.28□□□□□ -2.2
HLA-CQ95604 MIR140-201ENST00000385282 100 ntBASIC1.28□□□□□ -2.2
HLA-CQ95604 HMGN2P22-201ENST00000427588 175 ntBASIC1.28□□□□□ -2.2
HLA-CQ95604 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.28□□□□□ -2.21
HLA-CQ95604 Y_RNA.246-201ENST00000364495 108 ntBASIC1.27□□□□□ -2.21
HLA-CQ95604 MIR320A-201ENST00000385302 82 ntBASIC1.27□□□□□ -2.21
HLA-CQ95604 RNU6-808P-201ENST00000391233 108 ntBASIC1.27□□□□□ -2.21
HLA-CQ95604 U6.96-201ENST00000636425 70 ntBASIC1.27□□□□□ -2.21
HLA-CQ95604 SNORD114-29-201ENST00000364819 70 ntBASIC1.26□□□□□ -2.21
HLA-CQ95604 MIR516B1-201ENST00000385211 90 ntBASIC1.26□□□□□ -2.21
HLA-CQ95604 RNU1-29P-201ENST00000606574 126 ntBASIC1.26□□□□□ -2.21
HLA-CQ95604 MIR7974-201ENST00000615835 79 ntBASIC1.26□□□□□ -2.21
HLA-CQ95604 Y_RNA.722-201ENST00000517279 114 ntBASIC1.25□□□□□ -2.21
HLA-CQ95604 CYP3A54P-201ENST00000566950 75 ntBASIC1.25□□□□□ -2.21
HLA-CQ95604 RNA5SP517-201ENST00000364724 117 ntBASIC1.24□□□□□ -2.21
HLA-CQ95604 MIR150-201ENST00000385048 84 ntBASIC1.24□□□□□ -2.21
HLA-CQ95604 AC243829.6-201ENST00000612652 106 ntBASIC1.24□□□□□ -2.21
HLA-CQ95604 SNORD118-201ENST00000363593 134 ntBASIC1.23□□□□□ -2.21
HLA-CQ95604 AC211469.2-201ENST00000605461 205 ntBASIC1.23□□□□□ -2.21
HLA-CQ95604 SNORA2A-201ENST00000383885 135 ntBASIC1.22□□□□□ -2.21
HLA-CQ95604 SNORA40.8-201ENST00000411034 126 ntBASIC1.22□□□□□ -2.21
HLA-CQ95604 RNU7-119P-201ENST00000459279 63 ntBASIC1.22□□□□□ -2.21
HLA-CQ95604 AC243829.3-201ENST00000622177 108 ntBASIC1.22□□□□□ -2.21
HLA-CQ95604 SNORA36.2-201ENST00000384004 127 ntBASIC1.21□□□□□ -2.22
HLA-CQ95604 MIR4752-201ENST00000579672 72 ntBASIC1.21□□□□□ -2.22
HLA-CQ95604 RNA5SP457-201ENST00000363657 124 ntBASIC1.2□□□□□ -2.22
HLA-CQ95604 RNU6-110P-201ENST00000384508 104 ntBASIC1.2□□□□□ -2.22
HLA-CQ95604 MIR608-201ENST00000384820 100 ntBASIC1.2□□□□□ -2.22
HLA-CQ95604 MIR193B-201ENST00000384907 83 ntBASIC1.2□□□□□ -2.22
HLA-CQ95604 SNORD71-201ENST00000411292 86 ntBASIC1.2□□□□□ -2.22
HLA-CQ95604 AL590095.2-201ENST00000604136 117 ntBASIC1.2□□□□□ -2.22
HLA-CQ95604 RNA5SP61-201ENST00000516453 100 ntBASIC1.19□□□□□ -2.22
HLA-CQ95604 MIR1273G-201ENST00000577677 100 ntBASIC1.19□□□□□ -2.22
HLA-CQ95604 MIR373-201ENST00000362273 69 ntBASIC1.18□□□□□ -2.22
HLA-CQ95604 Y_RNA.68-201ENST00000362881 102 ntBASIC1.18□□□□□ -2.22
HLA-CQ95604 Y_RNA.74-201ENST00000362911 99 ntBASIC1.18□□□□□ -2.22
HLA-CQ95604 AC069271.1-201ENST00000445577 156 ntBASIC1.18□□□□□ -2.22
HLA-CQ95604 CYP3A137P-201ENST00000562436 69 ntBASIC1.18□□□□□ -2.22
HLA-CQ95604 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
HLA-CQ95604 RNU6-229P-201ENST00000516614 102 ntBASIC1.16□□□□□ -2.22
HLA-CQ95604 Y_RNA.325-201ENST00000365171 122 ntBASIC1.15□□□□□ -2.23
HLA-CQ95604 RNU6-863P-201ENST00000515989 104 ntBASIC1.15□□□□□ -2.23
HLA-CQ95604 RNU6-518P-201ENST00000516056 96 ntBASIC1.15□□□□□ -2.23
HLA-CQ95604 RNU7-154P-201ENST00000516194 62 ntBASIC1.15□□□□□ -2.23
HLA-CQ95604 RNA5SP470-201ENST00000516463 106 ntBASIC1.15□□□□□ -2.23
HLA-CQ95604 SNORA25.18-201ENST00000607153 114 ntBASIC1.15□□□□□ -2.23
HLA-CQ95604 SNORD116-16-201ENST00000384533 92 ntBASIC1.14□□□□□ -2.23
HLA-CQ95604 ACA64.5-201ENST00000516207 127 ntBASIC1.14□□□□□ -2.23
HLA-CQ95604 SNORD113-4-201ENST00000364802 75 ntBASIC1.13□□□□□ -2.23
HLA-CQ95604 RNY1P8-201ENST00000383970 114 ntBASIC1.13□□□□□ -2.23
HLA-CQ95604 RNU6-1184P-201ENST00000384588 108 ntBASIC1.13□□□□□ -2.23
HLA-CQ95604 MIR518A1-201ENST00000385068 85 ntBASIC1.13□□□□□ -2.23
HLA-CQ95604 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.13□□□□□ -2.23
HLA-CQ95604 MIR6857-201ENST00000613267 93 ntBASIC1.13□□□□□ -2.23
HLA-CQ95604 Y_RNA.115-201ENST00000363272 98 ntBASIC1.12□□□□□ -2.23
HLA-CQ95604 SNORA41B-201ENST00000384785 128 ntBASIC1.12□□□□□ -2.23
HLA-CQ95604 AC068338.1-201ENST00000565567 176 ntBASIC1.12□□□□□ -2.23
HLA-CQ95604 MIR7978-201ENST00000636158 59 ntBASIC1.12□□□□□ -2.23
HLA-CQ95604 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HLA-CQ95604 Y_RNA.433-201ENST00000384089 102 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms