Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC006210.1-201ENST00000424882 111 ntBASIC0.7□□□□□ -2.3
SIMC1Q8NDZ2 RNU6-982P-201ENST00000516216 102 ntBASIC0.7□□□□□ -2.3
SIMC1Q8NDZ2 SNORD114-4-201ENST00000363962 75 ntBASIC0.69□□□□□ -2.3
SIMC1Q8NDZ2 RNA5SP330-201ENST00000517096 96 ntBASIC0.69□□□□□ -2.3
SIMC1Q8NDZ2 AC005520.4-201ENST00000604337 90 ntBASIC0.69□□□□□ -2.3
SIMC1Q8NDZ2 SNORA70.25-201ENST00000612741 95 ntBASIC0.69□□□□□ -2.3
SIMC1Q8NDZ2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.69□□□□□ -2.3
SIMC1Q8NDZ2 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
SIMC1Q8NDZ2 SNORA2.1-201ENST00000363089 137 ntBASIC0.68□□□□□ -2.3
SIMC1Q8NDZ2 RNU6-630P-201ENST00000391258 106 ntBASIC0.68□□□□□ -2.3
SIMC1Q8NDZ2 AC069271.1-201ENST00000445577 156 ntBASIC0.68□□□□□ -2.3
SIMC1Q8NDZ2 RNA5SP147-201ENST00000516493 109 ntBASIC0.68□□□□□ -2.3
SIMC1Q8NDZ2 RNU1-29P-201ENST00000606574 126 ntBASIC0.68□□□□□ -2.3
SIMC1Q8NDZ2 SNORA25.18-201ENST00000607153 114 ntBASIC0.68□□□□□ -2.3
SIMC1Q8NDZ2 MIR8087-201ENST00000612745 78 ntBASIC0.68□□□□□ -2.3
SIMC1Q8NDZ2 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
SIMC1Q8NDZ2 RNA5SP257-201ENST00000363023 116 ntBASIC0.67□□□□□ -2.3
SIMC1Q8NDZ2 Y_RNA.407-201ENST00000383986 113 ntBASIC0.67□□□□□ -2.3
SIMC1Q8NDZ2 MIR652-201ENST00000385278 98 ntBASIC0.67□□□□□ -2.3
SIMC1Q8NDZ2 MIR548AE1-201ENST00000583292 70 ntBASIC0.67□□□□□ -2.3
SIMC1Q8NDZ2 MIR4473-201ENST00000583731 91 ntBASIC0.67□□□□□ -2.3
SIMC1Q8NDZ2 AC092634.7-201ENST00000621022 103 ntBASIC0.67□□□□□ -2.3
SIMC1Q8NDZ2 RNA5SP347-201ENST00000362445 119 ntBASIC0.66□□□□□ -2.3
SIMC1Q8NDZ2 SNORD118-201ENST00000363593 134 ntBASIC0.66□□□□□ -2.3
SIMC1Q8NDZ2 Y_RNA.443-201ENST00000384135 111 ntBASIC0.66□□□□□ -2.3
SIMC1Q8NDZ2 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
SIMC1Q8NDZ2 MIR330-201ENST00000362196 94 ntBASIC0.65□□□□□ -2.31
SIMC1Q8NDZ2 SCARNA17.3-201ENST00000516381 125 ntBASIC0.65□□□□□ -2.31
SIMC1Q8NDZ2 RNU6-645P-201ENST00000364649 106 ntBASIC0.64□□□□□ -2.31
SIMC1Q8NDZ2 SNORA40.8-201ENST00000411034 126 ntBASIC0.64□□□□□ -2.31
SIMC1Q8NDZ2 HMGN2P22-201ENST00000427588 175 ntBASIC0.64□□□□□ -2.31
SIMC1Q8NDZ2 RNU4-54P-201ENST00000516428 129 ntBASIC0.64□□□□□ -2.31
SIMC1Q8NDZ2 RNA5SP62-201ENST00000363457 110 ntBASIC0.63□□□□□ -2.31
SIMC1Q8NDZ2 SNORA25.4-201ENST00000363666 124 ntBASIC0.63□□□□□ -2.31
SIMC1Q8NDZ2 MTND4LP1-201ENST00000446263 157 ntBASIC0.63□□□□□ -2.31
SIMC1Q8NDZ2 snoU13.13-201ENST00000458842 104 ntBASIC0.63□□□□□ -2.31
SIMC1Q8NDZ2 MIR4711-201ENST00000578274 70 ntBASIC0.63□□□□□ -2.31
SIMC1Q8NDZ2 MIR5706-201ENST00000579841 80 ntBASIC0.63□□□□□ -2.31
SIMC1Q8NDZ2 MIR6739-201ENST00000622461 75 ntBASIC0.63□□□□□ -2.31
SIMC1Q8NDZ2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
SIMC1Q8NDZ2 MIR518A1-201ENST00000385068 85 ntBASIC0.62□□□□□ -2.31
SIMC1Q8NDZ2 RNU6-656P-201ENST00000516785 107 ntBASIC0.62□□□□□ -2.31
SIMC1Q8NDZ2 uc_338.10-201ENST00000621872 182 ntBASIC0.62□□□□□ -2.31
SIMC1Q8NDZ2 RNU6-668P-201ENST00000364180 107 ntBASIC0.61□□□□□ -2.31
SIMC1Q8NDZ2 Y_RNA.250-201ENST00000364542 110 ntBASIC0.61□□□□□ -2.31
SIMC1Q8NDZ2 RNU6-471P-201ENST00000383944 106 ntBASIC0.61□□□□□ -2.31
SIMC1Q8NDZ2 MIR582-201ENST00000365731 98 ntBASIC0.6□□□□□ -2.31
SIMC1Q8NDZ2 RNU6-945P-201ENST00000383947 107 ntBASIC0.6□□□□□ -2.31
SIMC1Q8NDZ2 Y_RNA.423-201ENST00000384057 113 ntBASIC0.6□□□□□ -2.31
SIMC1Q8NDZ2 MIR548E-201ENST00000408287 88 ntBASIC0.6□□□□□ -2.31
SIMC1Q8NDZ2 SNORD71-201ENST00000411292 86 ntBASIC0.6□□□□□ -2.31
SIMC1Q8NDZ2 RNU6-1232P-201ENST00000516299 86 ntBASIC0.6□□□□□ -2.31
SIMC1Q8NDZ2 AC243829.3-201ENST00000622177 108 ntBASIC0.6□□□□□ -2.31
SIMC1Q8NDZ2 MIR5087-201ENST00000635826 76 ntBASIC0.6□□□□□ -2.31
SIMC1Q8NDZ2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.6□□□□□ -2.31
SIMC1Q8NDZ2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
SIMC1Q8NDZ2 Y_RNA.125-201ENST00000363371 111 ntBASIC0.59□□□□□ -2.31
SIMC1Q8NDZ2 SNORA2A-201ENST00000383885 135 ntBASIC0.59□□□□□ -2.31
SIMC1Q8NDZ2 Y_RNA.633-201ENST00000459107 95 ntBASIC0.59□□□□□ -2.31
SIMC1Q8NDZ2 AC021146.9-201ENST00000512503 156 ntBASIC0.59□□□□□ -2.31
SIMC1Q8NDZ2 RNU6-229P-201ENST00000516614 102 ntBASIC0.59□□□□□ -2.31
SIMC1Q8NDZ2 RNU6-1162P-201ENST00000384443 104 ntBASIC0.58□□□□□ -2.32
SIMC1Q8NDZ2 MIR521-2-201ENST00000384818 87 ntBASIC0.58□□□□□ -2.32
SIMC1Q8NDZ2 MIR633-201ENST00000384821 98 ntBASIC0.58□□□□□ -2.32
SIMC1Q8NDZ2 RNA5SP193-201ENST00000410353 107 ntBASIC0.58□□□□□ -2.32
SIMC1Q8NDZ2 AC098934.3-201ENST00000430450 190 ntBASIC0.58□□□□□ -2.32
SIMC1Q8NDZ2 MIR4511-201ENST00000582784 87 ntBASIC0.58□□□□□ -2.32
SIMC1Q8NDZ2 MIR6755-201ENST00000619993 66 ntBASIC0.58□□□□□ -2.32
SIMC1Q8NDZ2 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.58□□□□□ -2.32
SIMC1Q8NDZ2 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.57□□□□□ -2.32
SIMC1Q8NDZ2 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
SIMC1Q8NDZ2 SNORA63.6-201ENST00000364921 119 ntBASIC0.57□□□□□ -2.32
SIMC1Q8NDZ2 MIR548C-201ENST00000384815 97 ntBASIC0.57□□□□□ -2.32
SIMC1Q8NDZ2 MIR548V-201ENST00000584165 80 ntBASIC0.57□□□□□ -2.32
SIMC1Q8NDZ2 MTND4LP19-201ENST00000403051 166 ntBASIC0.56□□□□□ -2.32
SIMC1Q8NDZ2 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.56□□□□□ -2.32
SIMC1Q8NDZ2 Y_RNA.375-201ENST00000365625 101 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 SNORA15B-2-201ENST00000384058 135 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 SNORA15B-1-201ENST00000384334 135 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 MIR1197-201ENST00000408818 88 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 RNU6-848P-201ENST00000515948 107 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 RNU6-617P-201ENST00000516147 107 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 RNU6-473P-201ENST00000516164 107 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 RNU6-1049P-201ENST00000516414 107 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 RNU6-1089P-201ENST00000516473 104 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 U7.6-201ENST00000610841 64 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 AC103706.3-201ENST00000636297 85 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 SNORA33.1-201ENST00000364957 130 ntBASIC0.54□□□□□ -2.32
SIMC1Q8NDZ2 MIR516B1-201ENST00000385211 90 ntBASIC0.54□□□□□ -2.32
SIMC1Q8NDZ2 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
SIMC1Q8NDZ2 RNA5SP299-201ENST00000391203 116 ntBASIC0.54□□□□□ -2.32
SIMC1Q8NDZ2 AC244090.1-201ENST00000441884 93 ntBASIC0.54□□□□□ -2.32
SIMC1Q8NDZ2 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
SIMC1Q8NDZ2 MIR20A-201ENST00000362279 71 ntBASIC0.53□□□□□ -2.32
SIMC1Q8NDZ2 RNA5SP192-201ENST00000364404 120 ntBASIC0.53□□□□□ -2.32
SIMC1Q8NDZ2 MIR501-201ENST00000390204 84 ntBASIC0.53□□□□□ -2.32
SIMC1Q8NDZ2 SNORA75.1-201ENST00000391130 148 ntBASIC0.53□□□□□ -2.32
SIMC1Q8NDZ2 AC110620.1-201ENST00000416042 228 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms