Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC006210.1-201ENST00000424882 111 ntBASIC0.7□□□□□ -2.3
SIMC1Q8NDZ2 RNU6-982P-201ENST00000516216 102 ntBASIC0.7□□□□□ -2.3
SIMC1Q8NDZ2 SNORD114-4-201ENST00000363962 75 ntBASIC0.69□□□□□ -2.3
SIMC1Q8NDZ2 RNA5SP330-201ENST00000517096 96 ntBASIC0.69□□□□□ -2.3
SIMC1Q8NDZ2 AC005520.4-201ENST00000604337 90 ntBASIC0.69□□□□□ -2.3
SIMC1Q8NDZ2 SNORA70.25-201ENST00000612741 95 ntBASIC0.69□□□□□ -2.3
SIMC1Q8NDZ2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.69□□□□□ -2.3
SIMC1Q8NDZ2 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
SIMC1Q8NDZ2 SNORA2.1-201ENST00000363089 137 ntBASIC0.68□□□□□ -2.3
SIMC1Q8NDZ2 RNU6-630P-201ENST00000391258 106 ntBASIC0.68□□□□□ -2.3
SIMC1Q8NDZ2 AC069271.1-201ENST00000445577 156 ntBASIC0.68□□□□□ -2.3
SIMC1Q8NDZ2 RNA5SP147-201ENST00000516493 109 ntBASIC0.68□□□□□ -2.3
SIMC1Q8NDZ2 RNU1-29P-201ENST00000606574 126 ntBASIC0.68□□□□□ -2.3
SIMC1Q8NDZ2 SNORA25.18-201ENST00000607153 114 ntBASIC0.68□□□□□ -2.3
SIMC1Q8NDZ2 MIR8087-201ENST00000612745 78 ntBASIC0.68□□□□□ -2.3
SIMC1Q8NDZ2 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
SIMC1Q8NDZ2 RNA5SP257-201ENST00000363023 116 ntBASIC0.67□□□□□ -2.3
SIMC1Q8NDZ2 Y_RNA.407-201ENST00000383986 113 ntBASIC0.67□□□□□ -2.3
SIMC1Q8NDZ2 MIR652-201ENST00000385278 98 ntBASIC0.67□□□□□ -2.3
SIMC1Q8NDZ2 MIR548AE1-201ENST00000583292 70 ntBASIC0.67□□□□□ -2.3
SIMC1Q8NDZ2 MIR4473-201ENST00000583731 91 ntBASIC0.67□□□□□ -2.3
SIMC1Q8NDZ2 AC092634.7-201ENST00000621022 103 ntBASIC0.67□□□□□ -2.3
SIMC1Q8NDZ2 RNA5SP347-201ENST00000362445 119 ntBASIC0.66□□□□□ -2.3
SIMC1Q8NDZ2 SNORD118-201ENST00000363593 134 ntBASIC0.66□□□□□ -2.3
SIMC1Q8NDZ2 Y_RNA.443-201ENST00000384135 111 ntBASIC0.66□□□□□ -2.3
SIMC1Q8NDZ2 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
SIMC1Q8NDZ2 MIR330-201ENST00000362196 94 ntBASIC0.65□□□□□ -2.31
SIMC1Q8NDZ2 SCARNA17.3-201ENST00000516381 125 ntBASIC0.65□□□□□ -2.31
SIMC1Q8NDZ2 RNU6-645P-201ENST00000364649 106 ntBASIC0.64□□□□□ -2.31
SIMC1Q8NDZ2 SNORA40.8-201ENST00000411034 126 ntBASIC0.64□□□□□ -2.31
SIMC1Q8NDZ2 HMGN2P22-201ENST00000427588 175 ntBASIC0.64□□□□□ -2.31
SIMC1Q8NDZ2 RNU4-54P-201ENST00000516428 129 ntBASIC0.64□□□□□ -2.31
SIMC1Q8NDZ2 RNA5SP62-201ENST00000363457 110 ntBASIC0.63□□□□□ -2.31
SIMC1Q8NDZ2 SNORA25.4-201ENST00000363666 124 ntBASIC0.63□□□□□ -2.31
SIMC1Q8NDZ2 MTND4LP1-201ENST00000446263 157 ntBASIC0.63□□□□□ -2.31
SIMC1Q8NDZ2 snoU13.13-201ENST00000458842 104 ntBASIC0.63□□□□□ -2.31
SIMC1Q8NDZ2 MIR4711-201ENST00000578274 70 ntBASIC0.63□□□□□ -2.31
SIMC1Q8NDZ2 MIR5706-201ENST00000579841 80 ntBASIC0.63□□□□□ -2.31
SIMC1Q8NDZ2 MIR6739-201ENST00000622461 75 ntBASIC0.63□□□□□ -2.31
SIMC1Q8NDZ2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
SIMC1Q8NDZ2 MIR518A1-201ENST00000385068 85 ntBASIC0.62□□□□□ -2.31
SIMC1Q8NDZ2 RNU6-656P-201ENST00000516785 107 ntBASIC0.62□□□□□ -2.31
SIMC1Q8NDZ2 uc_338.10-201ENST00000621872 182 ntBASIC0.62□□□□□ -2.31
SIMC1Q8NDZ2 RNU6-668P-201ENST00000364180 107 ntBASIC0.61□□□□□ -2.31
SIMC1Q8NDZ2 Y_RNA.250-201ENST00000364542 110 ntBASIC0.61□□□□□ -2.31
SIMC1Q8NDZ2 RNU6-471P-201ENST00000383944 106 ntBASIC0.61□□□□□ -2.31
SIMC1Q8NDZ2 MIR582-201ENST00000365731 98 ntBASIC0.6□□□□□ -2.31
SIMC1Q8NDZ2 RNU6-945P-201ENST00000383947 107 ntBASIC0.6□□□□□ -2.31
SIMC1Q8NDZ2 Y_RNA.423-201ENST00000384057 113 ntBASIC0.6□□□□□ -2.31
SIMC1Q8NDZ2 MIR548E-201ENST00000408287 88 ntBASIC0.6□□□□□ -2.31
SIMC1Q8NDZ2 SNORD71-201ENST00000411292 86 ntBASIC0.6□□□□□ -2.31
SIMC1Q8NDZ2 RNU6-1232P-201ENST00000516299 86 ntBASIC0.6□□□□□ -2.31
SIMC1Q8NDZ2 AC243829.3-201ENST00000622177 108 ntBASIC0.6□□□□□ -2.31
SIMC1Q8NDZ2 MIR5087-201ENST00000635826 76 ntBASIC0.6□□□□□ -2.31
SIMC1Q8NDZ2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.6□□□□□ -2.31
SIMC1Q8NDZ2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
SIMC1Q8NDZ2 Y_RNA.125-201ENST00000363371 111 ntBASIC0.59□□□□□ -2.31
SIMC1Q8NDZ2 SNORA2A-201ENST00000383885 135 ntBASIC0.59□□□□□ -2.31
SIMC1Q8NDZ2 Y_RNA.633-201ENST00000459107 95 ntBASIC0.59□□□□□ -2.31
SIMC1Q8NDZ2 AC021146.9-201ENST00000512503 156 ntBASIC0.59□□□□□ -2.31
SIMC1Q8NDZ2 RNU6-229P-201ENST00000516614 102 ntBASIC0.59□□□□□ -2.31
SIMC1Q8NDZ2 RNU6-1162P-201ENST00000384443 104 ntBASIC0.58□□□□□ -2.32
SIMC1Q8NDZ2 MIR521-2-201ENST00000384818 87 ntBASIC0.58□□□□□ -2.32
SIMC1Q8NDZ2 MIR633-201ENST00000384821 98 ntBASIC0.58□□□□□ -2.32
SIMC1Q8NDZ2 RNA5SP193-201ENST00000410353 107 ntBASIC0.58□□□□□ -2.32
SIMC1Q8NDZ2 AC098934.3-201ENST00000430450 190 ntBASIC0.58□□□□□ -2.32
SIMC1Q8NDZ2 MIR4511-201ENST00000582784 87 ntBASIC0.58□□□□□ -2.32
SIMC1Q8NDZ2 MIR6755-201ENST00000619993 66 ntBASIC0.58□□□□□ -2.32
SIMC1Q8NDZ2 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.58□□□□□ -2.32
SIMC1Q8NDZ2 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.57□□□□□ -2.32
SIMC1Q8NDZ2 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
SIMC1Q8NDZ2 SNORA63.6-201ENST00000364921 119 ntBASIC0.57□□□□□ -2.32
SIMC1Q8NDZ2 MIR548C-201ENST00000384815 97 ntBASIC0.57□□□□□ -2.32
SIMC1Q8NDZ2 MIR548V-201ENST00000584165 80 ntBASIC0.57□□□□□ -2.32
SIMC1Q8NDZ2 MTND4LP19-201ENST00000403051 166 ntBASIC0.56□□□□□ -2.32
SIMC1Q8NDZ2 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.56□□□□□ -2.32
SIMC1Q8NDZ2 Y_RNA.375-201ENST00000365625 101 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 SNORA15B-2-201ENST00000384058 135 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 SNORA15B-1-201ENST00000384334 135 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 MIR1197-201ENST00000408818 88 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 RNU6-848P-201ENST00000515948 107 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 RNU6-617P-201ENST00000516147 107 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 RNU6-473P-201ENST00000516164 107 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 RNU6-1049P-201ENST00000516414 107 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 RNU6-1089P-201ENST00000516473 104 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 U7.6-201ENST00000610841 64 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 AC103706.3-201ENST00000636297 85 ntBASIC0.55□□□□□ -2.32
SIMC1Q8NDZ2 SNORA33.1-201ENST00000364957 130 ntBASIC0.54□□□□□ -2.32
SIMC1Q8NDZ2 MIR516B1-201ENST00000385211 90 ntBASIC0.54□□□□□ -2.32
SIMC1Q8NDZ2 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
SIMC1Q8NDZ2 RNA5SP299-201ENST00000391203 116 ntBASIC0.54□□□□□ -2.32
SIMC1Q8NDZ2 AC244090.1-201ENST00000441884 93 ntBASIC0.54□□□□□ -2.32
SIMC1Q8NDZ2 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
SIMC1Q8NDZ2 MIR20A-201ENST00000362279 71 ntBASIC0.53□□□□□ -2.32
SIMC1Q8NDZ2 RNA5SP192-201ENST00000364404 120 ntBASIC0.53□□□□□ -2.32
SIMC1Q8NDZ2 MIR501-201ENST00000390204 84 ntBASIC0.53□□□□□ -2.32
SIMC1Q8NDZ2 SNORA75.1-201ENST00000391130 148 ntBASIC0.53□□□□□ -2.32
SIMC1Q8NDZ2 AC110620.1-201ENST00000416042 228 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms